Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g2902 ATGGCTCATCATTTTTCTAATAAGGCCTTAGGTTGTTTTCTTTTCTTTTCTTTTCTTCTTTCTTCTTATTCAACCTATGGCCAAAGTCATTTTATCTTAGATCCAATAGAGGATTTTGGTGATTTTGGTGGTGATTTTGGTGGTGATTTTGATGATGATGTTACAATTATAAATGAAAATGATTTTGCTCCGGCTCAATCACCATCAATAATCACAGATTCTCCAACTCCTGCTCCAGCACCTGAAATTGAAATTGAAAATGTCAATGATAAAAATAATGATGCTTCTGCCACAAGTTTTCCTAATGAGAGGCTAAGAAGTGCTTATATTGCATTGCAAGCGTGGAAAGATGTAATGTATTCCGATCCTTATGACACAACTGGTGATTGGGTTGGTAATGATGTGTGTTCTTACACCGGTGTGTTTTGTGCATCGGCTCTTGATGATCCAACATTGAATGTTGTTGCTGGTGTTGATCTTAACCATGCCGACATTGCTGGTCACCTTCCGGAAGAGTTAGGATTATTGAATGATACCGCTCTTTTCCACATTAACTCAAATAGATTTTGTGGTATTGTTCCTGAGAGCTTAAAAAATCTAACCATTATGCATGAGTTTGATATTAGTAACAACCGTTTCGTCGGTGGTTTTCCTTCTGTGGTACTCGAATGGCCAGATTTGAAGTACTTGGATATTAGATACAATGACTTTGAGGGATGTTTACCTCCTGAGCTATTTGAGAAAGAACTCGATGCGATATTTTTGAACAATAACCGATTCACATGTGGTATACCAGAAACACTTGGAAAATCAACTGCCTCTGTTGTGACTTTTGCTAACAATCATTTCACAGGTTGTATTCCAAAATCAATCGGAAACATGGCGAACTTGAATGAGATTGTGTTATTGGAAAATGGTCTTGGTGGTTGTTTTCCACAAGAAATTGGTTTGTTAGAGAATGTAACTGTTTTGGATGCTAGCAATAATGGGTTTGTTGGGACTCTACCAAATTTATCAGGATTAAAGAATGTTGAGGTTATTGACATAGCACACAACATGCTTAGTGGATATGTTTCAAACACTATTTGTCAACTACCTTTGTTGAAGAACTTCACATTCTCTCACAATTACTTTAATGGAGAAGCTCAAACTTGTATTCCTTCAAAAAATTCTGATGTTGTATTTGATGATGCTAAAAATTGTTTACCAGGAAGGAAGAATCAAAAGACATCCAAGCAATGTTTACCAGTTCTAACTAAACATGTGGATTGTAGCAAAAATTGTGGTGGTGGAGGAAAAGGACATAGTCCTGCTCCATCGACGCCAAAACCAACTCCATCAAATCCACCAAAGTCTCATCCTCCTAAGGAAGAGACACCAAAGGCTCAACCACCACCAATTTTGCCACCTGTTGAAGATATTCCACCAACTCTACCACCGGTCGAGGACATTCCACCAACAAGAGCACCGGTCGTGGACATTCCCCCTACACTACCACCGGTTGAAGACATTCCACCAACAAGAGCACCGGTCGTGGACATTCCCCCTACACTACCACCGGTTGAAGACATTCCACCAACGAGAGCACCGGTCGTGGACATTCCCCCTACACTACCACCAGTTGAAGACATTCCACCAACGAGAGCACCGGTCGTGGACATTCCCCCTACACTACCACCAGTTGAAGATATTCCACCAAAGCGTGCACCAGTGTCATCACCACCACCACCTGTGAGTCGTGTCATTCCCCCTGGACTTTTCAAATCACCACCACCACCAGTTTACTCTCCTCCACCACCTGTCCACTCACCTCCTCCACCAGTCTACTCTCCACCACCACCACCACCTGTTCACTCACCCCCTCCACCAGTCCACTCTCCACCACCACCACCAGTTCATTCACCTCCTCCTCCAGTTCATTCTCCTCCACCACCAGTCCACTCTCCACCACCACCTGTCTACTCACCTCCACCACCAGTCCACTCTCCACCACCACCTGTCTACTCACCTCCTCCACCAGTCCACTCCCCACCACCACCACCGGTGTACTCCCCTCCACCACCCCCACCAGTCTACTCTCCACCCCCACCAGTTTACTCTCCACCGCCACCAGTACAATCTCCACCGCCACCAATGGTAAACTCTCCACCACCACCTGTCCACTCTCCTCCTCCTCCACCGGTCAACTCTCCACCACCACCACCACCAACATGGGAAGACATTATCTTGCCACCAATATTTGGAGCTGAATATAGGTCGCCTCCTCCCCCAGCAATTGTTGGATACTAA 2289 0.4447 MAHHFSNKALGCFLFFSFLLSSYSTYGQSHFILDPIEDFGDFGGDFGGDFDDDVTIINENDFAPAQSPSIITDSPTPAPAPEIEIENVNDKNNDASATSFPNERLRSAYIALQAWKDVMYSDPYDTTGDWVGNDVCSYTGVFCASALDDPTLNVVAGVDLNHADIAGHLPEELGLLNDTALFHINSNRFCGIVPESLKNLTIMHEFDISNNRFVGGFPSVVLEWPDLKYLDIRYNDFEGCLPPELFEKELDAIFLNNNRFTCGIPETLGKSTASVVTFANNHFTGCIPKSIGNMANLNEIVLLENGLGGCFPQEIGLLENVTVLDASNNGFVGTLPNLSGLKNVEVIDIAHNMLSGYVSNTICQLPLLKNFTFSHNYFNGEAQTCIPSKNSDVVFDDAKNCLPGRKNQKTSKQCLPVLTKHVDCSKNCGGGGKGHSPAPSTPKPTPSNPPKSHPPKEETPKAQPPPILPPVEDIPPTLPPVEDIPPTRAPVVDIPPTLPPVEDIPPTRAPVVDIPPTLPPVEDIPPTRAPVVDIPPTLPPVEDIPPTRAPVVDIPPTLPPVEDIPPKRAPVSSPPPPVSRVIPPGLFKSPPPPVYSPPPPVHSPPPPVYSPPPPPPVHSPPPPVHSPPPPPVHSPPPPVHSPPPPVHSPPPPVYSPPPPVHSPPPPVYSPPPPVHSPPPPPVYSPPPPPPVYSPPPPVYSPPPPVQSPPPPMVNSPPPPVHSPPPPPVNSPPPPPPTWEDIILPPIFGAEYRSPPPPAIVGY* 763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g2902 762 MobiDBLite consensus disorder prediction 700 741 - -
Tpr1g2902 762 SUPERFAMILY L domain-like 110 384 - -
Tpr1g2902 762 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 634 757 - -
Tpr1g2902 762 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 12 651 - -
Tpr1g2902 762 MobiDBLite consensus disorder prediction 541 671 - -
Tpr1g2902 762 PANTHER POLLEN-SPECIFIC LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3 12 651 - -
Tpr1g2902 762 PANTHER POLLEN-SPECIFIC LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3 634 757 - -
Tpr1g2902 762 MobiDBLite consensus disorder prediction 432 466 - -
Tpr1g2902 762 Gene3D Ribonuclease Inhibitor 108 404 IPR032675 -
Tpr1g2902 762 MobiDBLite consensus disorder prediction 439 466 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g2902 Tpr-Chr1 33394229 33396706 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g2902 100 427 Trihelix Transcription Factor Family AT1G49490 67.781 7.56e-166 498
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g2902 - - gmx:100804536 637.106