Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g2895 ATGGCATCTTTAGAACCATCACCATCTACCACCACCAACAACAACCAGCAAGACCTCCCACTAAAACAAATCCCAGGCACCTATGGTCTCCCCTTCATCGGACCGATTTTCGACCGCCATGACTACTTCTACAACCAAGGTAAAGACAAATTCTTCTCAACAAGAATCCAAAAATACAATTCAACAATCTTTAGAACAAACATGCCACCAGGTCCCTTCATTTCCTCAAACCCAAGAGTCATAGCACTCTTAGACGCCGCATCTTTTCCGATCCTCTTCAACAACAAAAAAGTCGAAAAATATAATGTCCTCGACGGTACATTCATGCCGTCGACAAATTTCACCGGCGGTTACCGTGTTTGTGCTTACTTAGACACAACTGAACCAAGCCATGCACTTATCAAAGGTTTCTATCTTAATACTCTTTTGTCAAGAAAAGACACTTTTGTCCCTCTTTTTAGAACTATACTTTCTGATGCTTTTAATGTGATTGAAGATGAGCTTGCTAGTAAAAATGGTAAAGCAGATTTTAACTCTGTTGTTAGTGATGCTTCATTTAACTTCATGTTTCGTCTCTTTTGTGATAATAAAGACCCTTCTGAAACTATCCTTGGTTCTCAAGGTCCTAAAATGTTTGATACATGGCTACTATTTCAACTTGCTCCACTTGCAACTTTAGGGCCCCCTAAGATATTTAATTATCTTGAAGATCTCTTGCTTCGTACTATTCCATTTCCAGCTTGTTTGGCAAGGTCTTCTTACAAGAAGCTCTACGAAACATTTTCTTCATCAGCGGTAACACTTTTAAACGAAGCAGAAAAAGCCGGTTTAAAAAGAAGTGAAGTCTGCCACAATATCGTTTTCACAGCCGGCTTCAACGCATATGGAGGATTAAAGAATCAATTCCCAATTCTCTTCAAATGGGTCGGTCTAAGCGGCCTTTCACTACACAAAGAACTCGCAAACGAGATAAGAACCGTTGTAAAACAAGAAGGCGGAGTAACAATTCAGTCATTGGAAAAAATGTCGTTAGTAAAATCCGTTGTTTATGAAGCAATGCGAATAGAACCTGCCGTCCCTTATCAATATGCAAAAGCAAGAGAAGATTTGATCGTGAAGAGTCATGATGCAAGTTTCGAAATTAAAAAAGGTGAGATGATATTTGGATACCAACCGTTCGCGACTAAGGATCCTAGGGTTTTCGATGATGCCGAGGTTTTCGTTCCAAATAGGTTTATTGGAGAAGGTGAGAAGTTGTTGAAGTATGTTTTATGGTCTAATGGGAAAGAAATAGAGGAGCCTTCTATAGATAATAAACAATGTCCAGGGAAGAATCTTGTTGTGCTTTTGTGTAGATTGTTCTTGGTGGAGTTTTTCTTGCATTATGATACTTTTGGATTTGAGTCTAAAAATAATGCTTTTGGTGCTGCTGTTACTATTACTTCACTCACTAAGGCTTCTACGATTTGA 1470 0.3891 MASLEPSPSTTTNNNQQDLPLKQIPGTYGLPFIGPIFDRHDYFYNQGKDKFFSTRIQKYNSTIFRTNMPPGPFISSNPRVIALLDAASFPILFNNKKVEKYNVLDGTFMPSTNFTGGYRVCAYLDTTEPSHALIKGFYLNTLLSRKDTFVPLFRTILSDAFNVIEDELASKNGKADFNSVVSDASFNFMFRLFCDNKDPSETILGSQGPKMFDTWLLFQLAPLATLGPPKIFNYLEDLLLRTIPFPACLARSSYKKLYETFSSSAVTLLNEAEKAGLKRSEVCHNIVFTAGFNAYGGLKNQFPILFKWVGLSGLSLHKELANEIRTVVKQEGGVTIQSLEKMSLVKSVVYEAMRIEPAVPYQYAKAREDLIVKSHDASFEIKKGEMIFGYQPFATKDPRVFDDAEVFVPNRFIGEGEKLLKYVLWSNGKEIEEPSIDNKQCPGKNLVVLLCRLFLVEFFLHYDTFGFESKNNAFGAAVTITSLTKASTI* 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g2895 489 PANTHER FATTY ACID HYDROPEROXIDE LYASE 1 487 - -
Tpr1g2895 489 SUPERFAMILY Cytochrome P450 19 463 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g2895 489 MobiDBLite consensus disorder prediction 1 20 - -
Tpr1g2895 489 PRINTS E-class P450 group IV signature 342 358 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g2895 489 PRINTS E-class P450 group IV signature 379 393 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g2895 489 PRINTS E-class P450 group IV signature 395 413 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g2895 489 PRINTS E-class P450 group IV signature 441 459 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g2895 489 PANTHER CYTOCHROME P450 26 1 487 - -
Tpr1g2895 489 Pfam Cytochrome P450 317 422 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g2895 489 Gene3D Cytochrome P450 15 488 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g2895 Tpr-Chr1 33326332 33329554 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g2895 2 487 Cytochrome P450 AT5G42650 48.361 1.00e-171 492
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g2895 K01723 - gmx:100801764 749.199