LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Tpr1g2894	ATGACATCTTTAGAACAATCTTCCAAAACCACCAACAACCACCAGCAAGACCTCCCACTAAAACAAATCCCAGGCAGCTATGGCCTCCCCTTCATCGGACCGATTTTCGACCGACACGACTATTTCTACAACCAAGGTAGAGACAAATTCTTCTCAACAAGAATTCAAAAATACAATTCAACAGTCTTTAGAACCAACATGCCACCAGGTCCATTCATTGCCTCAAACCCTAGAGTCATAGCTCTCTTAGACGCCGCATCCTTCCCGATCCTCTTCGACAATAAAAAAGTCGAGAAACACAACGTCTTTGACGGTACCTTCATGCCATCGACAAATTTCACCGGCGGCTACCGTATCTTATCTCAATTAGACACAACTGAACCAAACCATGCTCTTATAAAAGGTCTCTTGCTTAATGCTCTTTTGTTGAGAAAAGACAATGTTATCCCTCTTTTTAAGAGTATACTTTCTGATTCTTTTAATAAGATTGAAGATGAACTTTCTGAAAAAAGTGGTAAAGCTGATTTTAACACTATTTTTAGTGAGGCTTCTTTTAATTTCTTGTTTAGTCTCTTTTGTGATAATAAGTATCCTTCTGAAACTAACCTTGGTTCTCAAGGTCCTAAAATGTTGGACACATGGATTCTCTTTCAAATTGCTCCAATTGAAACATTAAAACCTCCTAAGATTTTCAATTATCTTGAAGATCTATTGCTTCGTACAGTTCCCATTCCAGCTTGTTTAACAAGGTCCTCTTACAAGAAGCTCTACGAAGCATTTTCTTCTTCTGCTGTAACAATTTTAGACGAAGCCGAAAAAGTAGGGTTGAAAAGAAGTGAAGCATGTCACAATCTCATTTTCATAGCCGGCTTTAATGGATATGCCGGATTAAAGAATCAATTTCCAACACTCTTCAAATGGATAGGTTTATCCGGTGAAGAGCTACACAAAGAACTCGCAAACGAGATAAGAACCATTGTAAAACAAGAAGGCGGAGTAACAATTCAGTCATTGGAAAAAATGTCGTTAGTAAAATCCGTTATTTATGAAGCAATGCGAATAGAGCCCATCGTACCTTATCAATATGCAAAGGCAAGAGAAGATTTGATTGTGAAGAGTCATGATGCAAGTTTTGAAATAAAAAAGGGTGAGACGATATTCGGATACCAACCTTTTGCTACTAAGGATCCTAGGATTTTCGATGATCCCGAGGTTTTCGTTCCAAAGAGGTTTATTGGAGAAGGTGAGAAGTTGTTGAAATATGTTTTATGGTCAAATGGGAGAGAAACGGAGAACCCTAGTGTGGATAATAAACAATGTCCTGGGAAAAATCTTGTTGTGCTTTTGTGTAGATTGTTTTTGGTGGAGTTTTTCTTGCGCTATGATACTTTTACTTTTGAGACTAAAGCTGCTGCTGTTGGTGTTTCTATTACCATTACCTCTCTCACCAAGGCTTCTACTCTCTAA	1467	0.3817	MTSLEQSSKTTNNHQQDLPLKQIPGSYGLPFIGPIFDRHDYFYNQGRDKFFSTRIQKYNSTVFRTNMPPGPFIASNPRVIALLDAASFPILFDNKKVEKHNVFDGTFMPSTNFTGGYRILSQLDTTEPNHALIKGLLLNALLLRKDNVIPLFKSILSDSFNKIEDELSEKSGKADFNTIFSEASFNFLFSLFCDNKYPSETNLGSQGPKMLDTWILFQIAPIETLKPPKIFNYLEDLLLRTVPIPACLTRSSYKKLYEAFSSSAVTILDEAEKVGLKRSEACHNLIFIAGFNGYAGLKNQFPTLFKWIGLSGEELHKELANEIRTIVKQEGGVTIQSLEKMSLVKSVIYEAMRIEPIVPYQYAKAREDLIVKSHDASFEIKKGETIFGYQPFATKDPRIFDDPEVFVPKRFIGEGEKLLKYVLWSNGRETENPSVDNKQCPGKNLVVLLCRLFLVEFFLRYDTFTFETKAAAVGVSITITSLTKASTL*	489

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Tpr1g2894	488	SUPERFAMILY	Cytochrome P450	19	466	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Tpr1g2894	488	Pfam	Cytochrome P450	314	461	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Tpr1g2894	488	Gene3D	Cytochrome P450	14	487	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Tpr1g2894	488	PANTHER	CYTOCHROME P450 26	11	486	-	-
	Tpr1g2894	488	PANTHER	FATTY ACID HYDROPEROXIDE LYASE	11	486	-	-
	Tpr1g2894	488	PRINTS	E-class P450 group IV signature	341	357	IPR002403	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Tpr1g2894	488	PRINTS	E-class P450 group IV signature	394	412	IPR002403	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Tpr1g2894	488	PRINTS	E-class P450 group IV signature	440	458	IPR002403	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Tpr1g2894	Tpr-Chr1	33308727	33311135	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Tpr1g2894	10	486	Cytochrome P450	AT5G42650	50.522	2.96e-173	496

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Tpr1g2894	K01723		-	gmx:100801764	721.465

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