Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g2894 ATGACATCTTTAGAACAATCTTCCAAAACCACCAACAACCACCAGCAAGACCTCCCACTAAAACAAATCCCAGGCAGCTATGGCCTCCCCTTCATCGGACCGATTTTCGACCGACACGACTATTTCTACAACCAAGGTAGAGACAAATTCTTCTCAACAAGAATTCAAAAATACAATTCAACAGTCTTTAGAACCAACATGCCACCAGGTCCATTCATTGCCTCAAACCCTAGAGTCATAGCTCTCTTAGACGCCGCATCCTTCCCGATCCTCTTCGACAATAAAAAAGTCGAGAAACACAACGTCTTTGACGGTACCTTCATGCCATCGACAAATTTCACCGGCGGCTACCGTATCTTATCTCAATTAGACACAACTGAACCAAACCATGCTCTTATAAAAGGTCTCTTGCTTAATGCTCTTTTGTTGAGAAAAGACAATGTTATCCCTCTTTTTAAGAGTATACTTTCTGATTCTTTTAATAAGATTGAAGATGAACTTTCTGAAAAAAGTGGTAAAGCTGATTTTAACACTATTTTTAGTGAGGCTTCTTTTAATTTCTTGTTTAGTCTCTTTTGTGATAATAAGTATCCTTCTGAAACTAACCTTGGTTCTCAAGGTCCTAAAATGTTGGACACATGGATTCTCTTTCAAATTGCTCCAATTGAAACATTAAAACCTCCTAAGATTTTCAATTATCTTGAAGATCTATTGCTTCGTACAGTTCCCATTCCAGCTTGTTTAACAAGGTCCTCTTACAAGAAGCTCTACGAAGCATTTTCTTCTTCTGCTGTAACAATTTTAGACGAAGCCGAAAAAGTAGGGTTGAAAAGAAGTGAAGCATGTCACAATCTCATTTTCATAGCCGGCTTTAATGGATATGCCGGATTAAAGAATCAATTTCCAACACTCTTCAAATGGATAGGTTTATCCGGTGAAGAGCTACACAAAGAACTCGCAAACGAGATAAGAACCATTGTAAAACAAGAAGGCGGAGTAACAATTCAGTCATTGGAAAAAATGTCGTTAGTAAAATCCGTTATTTATGAAGCAATGCGAATAGAGCCCATCGTACCTTATCAATATGCAAAGGCAAGAGAAGATTTGATTGTGAAGAGTCATGATGCAAGTTTTGAAATAAAAAAGGGTGAGACGATATTCGGATACCAACCTTTTGCTACTAAGGATCCTAGGATTTTCGATGATCCCGAGGTTTTCGTTCCAAAGAGGTTTATTGGAGAAGGTGAGAAGTTGTTGAAATATGTTTTATGGTCAAATGGGAGAGAAACGGAGAACCCTAGTGTGGATAATAAACAATGTCCTGGGAAAAATCTTGTTGTGCTTTTGTGTAGATTGTTTTTGGTGGAGTTTTTCTTGCGCTATGATACTTTTACTTTTGAGACTAAAGCTGCTGCTGTTGGTGTTTCTATTACCATTACCTCTCTCACCAAGGCTTCTACTCTCTAA 1467 0.3817 MTSLEQSSKTTNNHQQDLPLKQIPGSYGLPFIGPIFDRHDYFYNQGRDKFFSTRIQKYNSTVFRTNMPPGPFIASNPRVIALLDAASFPILFDNKKVEKHNVFDGTFMPSTNFTGGYRILSQLDTTEPNHALIKGLLLNALLLRKDNVIPLFKSILSDSFNKIEDELSEKSGKADFNTIFSEASFNFLFSLFCDNKYPSETNLGSQGPKMLDTWILFQIAPIETLKPPKIFNYLEDLLLRTVPIPACLTRSSYKKLYEAFSSSAVTILDEAEKVGLKRSEACHNLIFIAGFNGYAGLKNQFPTLFKWIGLSGEELHKELANEIRTIVKQEGGVTIQSLEKMSLVKSVIYEAMRIEPIVPYQYAKAREDLIVKSHDASFEIKKGETIFGYQPFATKDPRIFDDPEVFVPKRFIGEGEKLLKYVLWSNGRETENPSVDNKQCPGKNLVVLLCRLFLVEFFLRYDTFTFETKAAAVGVSITITSLTKASTL* 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g2894 488 SUPERFAMILY Cytochrome P450 19 466 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g2894 488 Pfam Cytochrome P450 314 461 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g2894 488 Gene3D Cytochrome P450 14 487 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g2894 488 PANTHER CYTOCHROME P450 26 11 486 - -
Tpr1g2894 488 PANTHER FATTY ACID HYDROPEROXIDE LYASE 11 486 - -
Tpr1g2894 488 PRINTS E-class P450 group IV signature 341 357 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g2894 488 PRINTS E-class P450 group IV signature 394 412 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g2894 488 PRINTS E-class P450 group IV signature 440 458 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g2894 Tpr-Chr1 33308727 33311135 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g2894 10 486 Cytochrome P450 AT5G42650 50.522 2.96e-173 496
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g2894 K01723 - gmx:100801764 721.465