Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g2883 ATGGGGAAAAAAGAAGAATCAAATCATCCATTTGGCAGACCTTACAATTTTATGGTGCCTCAAGATCAAACTCCAAACAACCCTATGCTACCACATTGGACAACAAGTATGCAGTCTTATTACAATTTGGGGTCTACTCCGACTCCCATTTTTAATCCATTTCCTGCTGGTCCTTACTTGTACCATCAGTACATGTGGCCAAATCAGGTTCAGGCAAACAATGCACTACTTCATGATGCTTTACATGATCCCGCGAGGCTCTCCAATAAACCTCACATTGCTGAGGATGCTGCACTGGCCTTTTCAGAAGTGGTACAAAGGAATTTTGGCGAAAGAAACCCAAACTTCAACAAACTTTCTAGAAACTTACAACCCTTAAGATTAACAAGTGGGGTATCAAGAGAATGTGAAAACCAATCTTTAGCACCAAAAAATGACAGGGATGGAGCCTCAACGAGTGCAGCAAGTGGAAGCAAGAAATCATCAGATGAAAACCAAGATGACACTGACAAAGATTTTCCTTTAAGTAAGAAGCAGAAACCTGACTTGATTACTGGGGATGAAAATCCATCTGGGCTGACTCAGAATTTGGAGACAGTCGTCAAGGAATCTGATGCTGATGTTGATGGTGATGGTGATGGTGATGCTGACACTCAACTAAAATTTACGGAAGGCGATGATATAAGAAAAGAAAGAAAAAGACAGTCAAACAGGGAATCAGCCAAGAGATCAAGGATGAGGAAACAGCAAGAATGTGAAGAGCTATGTAAAAAGATAGACACTCTTAAGGATGAAAATTCAGTCCTAACACAAAGGCTCGTTGCACTTTCTGAGGAATGTATGGAGCTTACCAATGAAAATGATTCCATTCAGGAAGAGCTAATTACGAAGTATGGACGCGAATCAATTGAAGATCTATTGGACCTCATGAAGCCTCCTGCTTGA 945 0.4085 MGKKEESNHPFGRPYNFMVPQDQTPNNPMLPHWTTSMQSYYNLGSTPTPIFNPFPAGPYLYHQYMWPNQVQANNALLHDALHDPARLSNKPHIAEDAALAFSEVVQRNFGERNPNFNKLSRNLQPLRLTSGVSRECENQSLAPKNDRDGASTSAASGSKKSSDENQDDTDKDFPLSKKQKPDLITGDENPSGLTQNLETVVKESDADVDGDGDGDADTQLKFTEGDDIRKERKRQSNRESAKRSRMRKQQECEELCKKIDTLKDENSVLTQRLVALSEECMELTNENDSIQEELITKYGRESIEDLLDLMKPPA* 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g2883 314 CDD bZIP_plant_GBF1 230 281 IPR045314 GO:0003700|GO:0006355
Tpr1g2883 314 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 227 290 IPR004827 GO:0003700|GO:0006355
Tpr1g2883 314 Gene3D - 219 287 - -
Tpr1g2883 314 MobiDBLite consensus disorder prediction 214 250 - -
Tpr1g2883 314 Pfam bZIP transcription factor 227 287 IPR004827 GO:0003700|GO:0006355
Tpr1g2883 314 MobiDBLite consensus disorder prediction 130 160 - -
Tpr1g2883 314 SMART brlzneu 225 289 IPR004827 GO:0003700|GO:0006355
Tpr1g2883 314 SUPERFAMILY Leucine zipper domain 228 285 IPR046347 GO:0003700|GO:0006355
Tpr1g2883 314 MobiDBLite consensus disorder prediction 161 184 - -
Tpr1g2883 314 Coils Coil 238 293 - -
Tpr1g2883 314 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 312 IPR044827 GO:0003700|GO:0006355|GO:0043565
Tpr1g2883 314 MobiDBLite consensus disorder prediction 130 250 - -
Tpr1g2883 314 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 232 247 IPR004827 GO:0003700|GO:0006355
Tpr1g2883 314 PANTHER BZIP TRANSCRIPTION FACTOR 1 312 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g2883 31 306 bZIP Transcription Factor Family AT4G36730 29.123 1.72e-27 107
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Tpr1g2883 bZIP_1 1.5e-15 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g2883 K09060 - gmx:102665715 270.396