Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g2879 ATGGATTCTCCAACTTTTTACTTACTAAACCTTATCTCTTTTTTCCTCTTCATCCTTGTGGCACTTAGGAACACTCTCAAGAAAAAAGAGTCACCTCCAAACCTACCTCCAGGACCATGGAAACTACCTATTATAGGACACATACATCATCTAATTACATCCACACCACATCAAAAATTAAGAGACTTGGCCAAAATATATGGACCCTTAATGCACCTACAACTTGGAGAGATCTCTACAATTGTTGTTTCATCACCAGAGTATGCTAAAGAGGTACTTAAAACACATGATGTAATATTTGCATCTAGGCCTAAAATTGTTGCAGTAGATATACTATTATATGGATCAACAGATATTGCTTTTTCACCTTATGGAAATTATTGGAGACAACTAAGAAAAATATGCACAATTGAACTTCTTACTCAAAAACGTGTCAATTCATTCCAACCTATAAGAGAAGAAGAACTCACCAATCTCATCAAAAGGATTGATTCACAACAAGGGTCATCCATCAACATCACTCAAGCTATACTTGAATCAATAATGAATGTAACTACAAGGTCTGCATTTGGAAACAAATGTAAAGGCACAGAACAACTTGTATCATTGGCAAAGGGTGAATCAGTTGCAGGAGGTTTCGACATAGCGGAATTGTTTCCTTCTGTTAAATGGCTTCCACTTGTTTCTGGTTTGAGACCTAAACTTGAGAGGTTGCATAGACAAATTGATAAAATACTAGAAGACATCATCATTGAACATAAAGAAGCAAAGTCAAAAGAAGATCAAGGTGAAGTTGGAGAAGATCTAGTAGATGTTCTTCTAAAATTTCAAAGTGGTAATGATAATGATCAAGATATATGCTTAACTGACAACAATATCAAGGCTATAATCTTGAACATGATTGGTGCCGGAGGTGAAACAACATCTACTACCATAACTTGGGCAATGGCAGAGTTGGTAAGGGATCCAAGAGTGATGAAGAAAGCACAATATGAGGTGAGAGAAATATTCAACAAGAAAGGAATTGTTGGTGAAAACAATATAAATGAACTCAAATATTTGAAATTAGTTGTGAAAGAGAGTCTAAGGTTACACCCTCCAAGTCCTCTTTTACTTCCAAGAGAATGTGGACAAGCATGTGAGATTGACGGGTATCGTATACCAGCCAAAAGTAAGGTGATGGTGAATGCATGGGCAATTGGAAGAGATCCAAAGTATTGGTCTGACCCAGAGAGGTTTTATCCGGAGAGATTCGTTGATAGCTCTATTGACTACAAAGGGACTAATTTCGAGTACATTCCTTTTGGCGCTGGAAGAAGAATATGTCCTGGAATCACATTTGGTTTGATAAATGTTGAGTTGACACTTGCATTGTTGTTATATCACTTTGATTGGAAGCTTCCCAATGGAATGAAAGGTGAGGACTTGGACATGGTAGAACTATTTGGAGCTAATGTTAAAAGAAAAAATGACTTGTACTTGATACCCAATGCTCCTCTTCCTTCTTTGGTATAA 1515 0.3677 MDSPTFYLLNLISFFLFILVALRNTLKKKESPPNLPPGPWKLPIIGHIHHLITSTPHQKLRDLAKIYGPLMHLQLGEISTIVVSSPEYAKEVLKTHDVIFASRPKIVAVDILLYGSTDIAFSPYGNYWRQLRKICTIELLTQKRVNSFQPIREEELTNLIKRIDSQQGSSINITQAILESIMNVTTRSAFGNKCKGTEQLVSLAKGESVAGGFDIAELFPSVKWLPLVSGLRPKLERLHRQIDKILEDIIIEHKEAKSKEDQGEVGEDLVDVLLKFQSGNDNDQDICLTDNNIKAIILNMIGAGGETTSTTITWAMAELVRDPRVMKKAQYEVREIFNKKGIVGENNINELKYLKLVVKESLRLHPPSPLLLPRECGQACEIDGYRIPAKSKVMVNAWAIGRDPKYWSDPERFYPERFVDSSIDYKGTNFEYIPFGAGRRICPGITFGLINVELTLALLLYHFDWKLPNGMKGEDLDMVELFGANVKRKNDLYLIPNAPLPSLV* 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g2879 504 SUPERFAMILY Cytochrome P450 36 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g2879 504 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 9 497 - -
Tpr1g2879 504 Gene3D Cytochrome P450 28 492 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g2879 504 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g2879 504 PRINTS E-class P450 group I signature 88 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g2879 504 PRINTS E-class P450 group I signature 180 198 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g2879 504 PRINTS E-class P450 group I signature 292 309 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g2879 504 PRINTS E-class P450 group I signature 312 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g2879 504 PRINTS E-class P450 group I signature 355 373 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g2879 504 PRINTS E-class P450 group I signature 396 420 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g2879 504 PRINTS E-class P450 group I signature 432 442 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g2879 504 PRINTS E-class P450 group I signature 442 465 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g2879 504 Pfam Cytochrome P450 36 478 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g2879 504 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 435 444 IPR017972 GO:0005506|GO:0016705
Tpr1g2879 504 PANTHER CYTOCHROME P450 71B11-RELATED 9 497 - -
Tpr1g2879 504 PRINTS P450 superfamily signature 303 320 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g2879 504 PRINTS P450 superfamily signature 356 367 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g2879 504 PRINTS P450 superfamily signature 433 442 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g2879 Tpr-Chr1 33170416 33172728 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g2879 7 497 Cytochrome P450 AT3G26300 44.246 2.75e-140 412
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g2879 - - gmx:102665189 738.799