Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g2847 ATGTCATTTACAAAACGCCCCGAATTTAGGAAAATAGTGCAAGATCAGAAAACAAATGGGATTCCAAAGCATTATGGGGAGAAATATTGGAAAGGAACACCAAACCCAATAATCCTTAGACTCCCAAATGATTTTGAACAAGAAATATCTTGGGTTGAGAGTAATGGTAAAATTTTGTTTCAAAAAAATTGGAAAGGTTTTGCAAAACAAGTGAGTCATGGATGTGTCTTAACTTTTAAATACATAGGTGGATCACATTTTAAGGTTAAGATATTTGGTCCCAATGGTTTAGAAATAAACTATGCAGATATAAAATCTGTAAATGAAGAAGTTGTTGAAGTTACTGAAAAAGTTACAGAAATTATTGAAGTGAGAGATGATGAAAGTGATGATGAGATTGAAATACTAAAGCAAGCTCAAAGGACAAGAAATGGCAAGAGAAAATTCCAAGGTAGGAACCGAGGAAATATGGTGAAGAAGGCTACAAAGTATCCAACAAATGAAGCTGTTAATGATGAGAATCCCTTTTTTGATGTTAGGATGACAAAATCTTATGTCGATGGCCATTTCATGAAATTACAATGA 585 0.3316 MSFTKRPEFRKIVQDQKTNGIPKHYGEKYWKGTPNPIILRLPNDFEQEISWVESNGKILFQKNWKGFAKQVSHGCVLTFKYIGGSHFKVKIFGPNGLEINYADIKSVNEEVVEVTEKVTEIIEVRDDESDDEIEILKQAQRTRNGKRKFQGRNRGNMVKKATKYPTNEAVNDENPFFDVRMTKSYVDGHFMKLQ* 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g2847 194 Gene3D - 1 96 IPR015300 -
Tpr1g2847 194 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 4 190 - -
Tpr1g2847 194 PANTHER B3 DOMAIN-CONTAINING 4 190 - -
Tpr1g2847 194 SUPERFAMILY DNA-binding pseudobarrel domain 6 96 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g2847 Tpr-Chr1 32836950 32838232 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g2847 21 157 B3 DNA Binding Superfamily AT3G19184 28.846 6.33e-06 43.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g2847 - K15223 mtr:MTR_1g035570 213.772