Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g2834 ATGGCCATCTCCGAGTATTTTCCAGTCATAGGTGAATGGATAAAGAACATTTTCTTGATGCTATTTGCACTTTCATTTCTTGGCGGTGGCATCTTCGTGTTAATCATCGTCTATGCCCCCTCTGATATCAAGTTCCATGTAACTGATGCATCACTCACAAAGTTCAACCTCACAAACAACAATACCTTGGATTACAAGTTAGAAGCAAATATCACTTCAAGAAATCCCAACAAGAATGTCATTGTGTACTACAGGGAGATCGCTGCAATTGCATTCTACAAAGATCATAAATTTGCTACTGTCAATTTGACACCTTTTGATCAAGGCCACAAGACTACCAGTTTTCTTCATGTACTGTTTGAAGGTAAGGGTGTAATGAAGAAGAGCCTCCAACCTAAACAACTTTTCGAGTATGATCAAGAAACGCGTTTAGGGATCTATCATGACTTGGCTATAAATTTGGATATTTTAGCCACTTACAAGTTTCTAACACACAAGTCCACTCGCTACAATCCACCAATGGTGCAATGTCGTCGTTTGAGTCTTTCTGTGGTTTCTAACGGTAACTCGTCATCAACACCTTCTTTTCATGGTAGAAAATGTAGAATTCATCATTTCTTTGAAAATCGGTAG 633 0.387 MAISEYFPVIGEWIKNIFLMLFALSFLGGGIFVLIIVYAPSDIKFHVTDASLTKFNLTNNNTLDYKLEANITSRNPNKNVIVYYREIAAIAFYKDHKFATVNLTPFDQGHKTTSFLHVLFEGKGVMKKSLQPKQLFEYDQETRLGIYHDLAINLDILATYKFLTHKSTRYNPPMVQCRRLSLSVVSNGNSSSTPSFHGRKCRIHHFFENR* 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g2834 210 PANTHER HARPIN-INDUCED 1 30 203 - -
Tpr1g2834 210 PANTHER OS05G0367900 PROTEIN 30 203 IPR044839 GO:0098542
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g2834 Tpr-Chr1 32688237 32688892 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g2834 42 193 SNARE and Associated Proteins AT1G32270 32.692 2.12e-16 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g2834 - - gmx:100784278 187.963