Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g2833 ATGTTTGAGTATATTACATTATTTGTAGCCATTTTTTTCATGATATTCTACAATATTTGGAAACGCGACAAAAATAATGTAATTATAACAAATTGGCCAATAATTGGCATGCTACCATCAGTATTGCATAATCAATCCAATATTCATGATTATGCAACCTTTATTTTGAAACATTATGGTGGCACTTTTGTGTTCAAAGGACCTTGGTTCACAAACATTGCCAACTTTATCCTCACTAGTGATCCCATGAATGTGCACCACATCACTAGCAAGAATTTCACCAACTATGGGAAAGGGTCTGATTTCCATGAGATTTTTGAAGTTTTTGGTCTTGGTATTTTCAATTTGGATACCAATGAGTGGAAACAAGAGAGGACACTACTTCAATCATTGCTCAAAAGGAATAGTTTCAAGATATTCCTTGAACAAAACATTCAAAAGAAGCTAGAGAATTGCCTATTACCATTTCTTGATTATGCATCCAAAGGTGAACAAATACTTGATCTACAAGATATTCTTGAGAGGTTCACTTTCGATATTGCATTCACTTCTTTATTTGGATTTGATTCTAATATCCTTCCTAACAATCTCAATGAGCTCGAAGATATTGCTTATGTAAAAGCTATTTCTGTGCTTGAGGATATGATATTGTTGAGGCATCTCATTCCAAATTGTATTTGGAAGTTACAAAAATGGCTAAAAATTGGTCAAGAGAAGAAAGGAATGGTAGCTCAAGAAAAGCTTTATGAATTCTTGAACAACCGTATAGCTTATTATAAAGGCGATGAAGAGAAAAGAAGATTGAGAAGCAGTGAAGATGTGGATGAATCAAATTCTTGCTTGCTAAAAGAACTAATGAATGAAGGAATATTGGAAAAAGGGGAAATGGTTGAGACATACATTAGAGACACTGCAATCAATCTTTTGCTCGCAGGAAACGGATCAGTTAGTTCAAGTCTCAATTGGTTCTTTTGGCTTGTTTTGACTCATCCTATTGAAGAAGCTAAAATTATTCAAGAGATCAAAGATAATTGTTTAACACAAGAGGAGAAATTGATCGCAAATTTAAGTGTAGAAGAGCTTGATAAGCTAGTTTACCTTCATGGAGCTATTTGTGAAGCCTTAAGGCTTTATCCTCCTATAGCATTTGAACACAAGTGTGCAATTAAATATGATATACTACCTAGCGGAAATCATGTTAGTCCAAATACAAAGTTAATATATTCTTTGTATGCAATGGGAAGGATGGAACAAATATGGGGTGACGATTGTTTGGAATTTAAGCCAGAAAGATGGATATCAGACAGAGAACAAATTAAGCATGTACCATCTTACAAGTTCATAGCATTTAATGCAGGTCCTAGAAAGTGTATAGGGAAAGATATGAGCTTTGTTCAAATGAAAATGGTTGCAGTTGCATTGTTATTGAAGTTCAAGATACAAGTGGTGGAAGGTCACTCTATAACTCCAAGGGATTCTATTGTTATTCGTATGAAACATGGATTTAAGGTCAAAGTCAGTAAAAGATGCGTTTGA 1536 0.3411 MFEYITLFVAIFFMIFYNIWKRDKNNVIITNWPIIGMLPSVLHNQSNIHDYATFILKHYGGTFVFKGPWFTNIANFILTSDPMNVHHITSKNFTNYGKGSDFHEIFEVFGLGIFNLDTNEWKQERTLLQSLLKRNSFKIFLEQNIQKKLENCLLPFLDYASKGEQILDLQDILERFTFDIAFTSLFGFDSNILPNNLNELEDIAYVKAISVLEDMILLRHLIPNCIWKLQKWLKIGQEKKGMVAQEKLYEFLNNRIAYYKGDEEKRRLRSSEDVDESNSCLLKELMNEGILEKGEMVETYIRDTAINLLLAGNGSVSSSLNWFFWLVLTHPIEEAKIIQEIKDNCLTQEEKLIANLSVEELDKLVYLHGAICEALRLYPPIAFEHKCAIKYDILPSGNHVSPNTKLIYSLYAMGRMEQIWGDDCLEFKPERWISDREQIKHVPSYKFIAFNAGPRKCIGKDMSFVQMKMVAVALLLKFKIQVVEGHSITPRDSIVIRMKHGFKVKVSKRCV* 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g2833 511 PRINTS E-class P450 group IV signature 302 328 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g2833 511 PRINTS E-class P450 group IV signature 364 380 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g2833 511 PRINTS E-class P450 group IV signature 415 433 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g2833 511 PRINTS E-class P450 group IV signature 441 457 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g2833 511 PRINTS E-class P450 group IV signature 457 475 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g2833 511 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 450 459 IPR017972 GO:0005506|GO:0016705
Tpr1g2833 511 SUPERFAMILY Cytochrome P450 29 509 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g2833 511 PANTHER CYTOCHROME P450 13 506 - -
Tpr1g2833 511 PANTHER CYTOCHROME P450 FAMILY PROTEIN 13 506 - -
Tpr1g2833 511 PRINTS P450 superfamily signature 311 328 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g2833 511 PRINTS P450 superfamily signature 369 380 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g2833 511 PRINTS P450 superfamily signature 448 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g2833 511 PRINTS P450 superfamily signature 457 468 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g2833 511 Gene3D Cytochrome P450 11 510 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g2833 511 Pfam Cytochrome P450 30 505 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g2833 Tpr-Chr1 32670314 32672083 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g2833 13 509 Cytochrome P450 AT2G23180 40.675 2.10e-140 413
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g2833 - - cam:101494575 700.664