Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g2832 ATGAGCTTGTTTGAGTATATTACATTATCCTTAGTAGCCATTCTCTTTGTGATATTCTACAATATATGGAGACACAACAAAAATGTACTACAAAATTGGCCAATAATTGGCATGCTACCATCAGTTTTGCTCAACCAATCCAATATTCATGATCTTCTAACCTTACGATTAAAACGTTATGGAGGCACTTTTGATTTTAAAGGACCTTGGTTCACAAACATTGCCAGCTTTATCATCACCAGTGATCCGATGAATGTGCATCACATCACGAGCAAGAATTTCAGCAACTATGGTAAGGGATCTGATTTCCGTGAGATTTTCGAAGTTTTTGGTGATGGTATTTTCAATTTGGAATCCAATGAATGGAAACAAGAGAGAGAAATGTTTCATTCAATGCTCAAAAGAAAAGGCTTTAAGATATTCCTTCAACAAAACATTCAAAAGAAACTTGAGAATTGCCTATTACCATTTCTTGATCATGCATCCAAAGATGTACTGATAATTGATTTACAAGATATTCTTGGGAGGTTCACTTTTGATATTGCTTTCAATTCTATATTTGGATTTGATTCAAATTGCCTTCCTTACAACTTCAACGAGTTACCTGAAATTTCTTATGTAAAAGCTATTTCTGAGATCGAGGATATGCTATTTTCGCGACACTATATTCCAAAATGTATTTGGAAGCTACAAAAATGGCTAAATATTGGTTTAGAGAAGAAGGGCAAGGTAGCTCAAGAGAATCTTTACCAATTCTTGTACAAATATTGTACAGCAACTTATTACAAAGGCGCTGACGATGTGGTCGATTCTGATTCTTCCTTACTAAAAGAAGTAATGAAGGAAGGATTGAGAAAGGGGAAAATGGTTGAGAGATACACTAGAGACACTGTAGTCAACATCATGTTTGCAGGAAATGGAGCAGTTACTTCAGGTCTCAATTGGTTCTTTTGGCTTGTTTCAACTCATCCTATCGTGGAAGCTAAAATTATTCAAGAGATTAAAGATAATTTTCCAACACAAGAGGAGAACTTGATCAATAATTTAAATGTAGAAAAGCTTGATAAGCTAGTTTACCTTCATGGAGCTATATGTGAAGCCTTAAGGCTTTATCCTCCTCTACCATATGAACACAAGTGTGCAATTAAATCAGATATACTACCTAGTGGAGACCATGTTAAGCCAAATACAAAGTTAATATACTCTTTGTATGCAATGGGAAGGATGGAACAAATATGGGGAGAAGATTGTTTGGAATTTAAGCCGGAGAGATGGATATCAGATAGAGGACAGATTATACATGTACCGTCTTACAAGTTCATAGCATTTAATGCAGGTCCTAGAAAGTGTGTAGGGAAAGATATCAGCTTAGTTCAAATCAAAATGATTGCAATTGCTATGTTATGGAAGTTTCAAATACAGGTAGTGGAAGGTCACTCTGTTACTCCAAGAGTTGCTGTGGGTCTTAGCATGAAACTTGGCCTTAAAGTCAAAGTCAATAAAAGGAGCATTTGA 1515 0.3545 MSLFEYITLSLVAILFVIFYNIWRHNKNVLQNWPIIGMLPSVLLNQSNIHDLLTLRLKRYGGTFDFKGPWFTNIASFIITSDPMNVHHITSKNFSNYGKGSDFREIFEVFGDGIFNLESNEWKQEREMFHSMLKRKGFKIFLQQNIQKKLENCLLPFLDHASKDVLIIDLQDILGRFTFDIAFNSIFGFDSNCLPYNFNELPEISYVKAISEIEDMLFSRHYIPKCIWKLQKWLNIGLEKKGKVAQENLYQFLYKYCTATYYKGADDVVDSDSSLLKEVMKEGLRKGKMVERYTRDTVVNIMFAGNGAVTSGLNWFFWLVSTHPIVEAKIIQEIKDNFPTQEENLINNLNVEKLDKLVYLHGAICEALRLYPPLPYEHKCAIKSDILPSGDHVKPNTKLIYSLYAMGRMEQIWGEDCLEFKPERWISDRGQIIHVPSYKFIAFNAGPRKCVGKDISLVQIKMIAIAMLWKFQIQVVEGHSVTPRVAVGLSMKLGLKVKVNKRSI* 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g2832 504 PRINTS E-class P450 group IV signature 357 373 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g2832 504 PRINTS E-class P450 group IV signature 408 426 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g2832 504 PRINTS E-class P450 group IV signature 434 450 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g2832 504 PRINTS E-class P450 group IV signature 450 468 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g2832 504 PANTHER CYTOCHROME P450 FAMILY PROTEIN 16 498 - -
Tpr1g2832 504 PRINTS P450 superfamily signature 304 321 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g2832 504 PRINTS P450 superfamily signature 362 373 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g2832 504 PRINTS P450 superfamily signature 441 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g2832 504 PRINTS P450 superfamily signature 450 461 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g2832 504 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 443 452 IPR017972 GO:0005506|GO:0016705
Tpr1g2832 504 SUPERFAMILY Cytochrome P450 33 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g2832 504 PANTHER CYTOCHROME P450 16 498 - -
Tpr1g2832 504 Pfam Cytochrome P450 31 484 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g2832 504 Gene3D Cytochrome P450 22 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g2832 Tpr-Chr1 32650816 32652333 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g2832 1 503 Cytochrome P450 AT2G23180 40.927 4.16e-148 432
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g2832 - - cam:101494575 664.07