Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g2830 ATGTCTTTGTTTCAGTACTTCTCATTATTTGTAGCCATTCTCTTCATATTCTACAATATATGGAGATGGAAAAAAAAGGAATTTATACCAAATTGGCCAATAATTGGCATGCTTCCATCAATTTTGTATAATCAATCCAATATTCATGATTATGTAACCTTATTTTTGAAACATTATGGTGGCACTTTTCATTTCAAAGGACCTCGGTTCACAAACATTGCCAACTTTATCATCACCAGTGATCCTATGAATGTGCACCACATCACTAGCAAGAATTTCACCAACTATGGGAAAGGGTCTGATTTCCATGAGATTTTCGAAATTCTTGGTGTTGGTATTTTCAATTTGGATTCTAATGAATGGAAACAAGAAAGGACAGTACTTCATTCAATTATCAAAATGAAAAACATTGAGATATTCCATCAAAAAAACATTCAAAAGAAGCTAGAGAATTGCCTATTACCATTTCTTGATCATCAAGCATCAAAAGGTGTACAAGTATTTGATTTACAAGATATTCTTGAGAGGTTCACCTTTGATATTATTTGTACTCTTTTATTTGGATTTGATCCTAATTCCCTTCCTTACAAGTTCAATGAGTTACCAGATATCGGTTGCTTAAATGCTATTTCCTTGCTTGAGGATATGCTATTGTCGAGACACTATATTCCAAAATGTATTTGGAAGCTACAAAAATGGCTACAAATTGGTCAAGCAAAGAAGAACAAAGTAGCTGAAGAAAATCTTCACCAATTCATATACAACTCCATATCTTATTACAAAGGTGATGAAGATGTGGATGAATCTCCTTCTTACTTGCTAAAAGAACTAATGAAGGAAGGATCGGGAAACAACGAAAAGGCTAAGGAGTATATTAGAGACACAACACTAAATCTCTTGGCTGCTGGAAATGGAACAATAAGTTCTGGTCTCAGTTGGTTTTTTTGGCTTGTTTCAAATCATCCTATTGTAGAAGCTAAAATTATTAAAGAGATCAAAGATAATCGTCTAACACAAGAGGAGAATTTTGTCACTAATTTAAGTGTAGAAGTTCTTGATAAGCTAGTTTACCTTCATGCAGCTATATGTGAAGCCTTAAGGCTTTATCCTCCTTTAGCATTTCAACACAAATGTGCAATCAAAGATGATATACTATCTAGTGGAGATCATGTAAGTCCAAATACAAAGTTAATATATTCTTTGTATGCGATGGGAAGGATGGAACAAATATGGGGTGAAGATTGTTTGGAATTTAAGCCTGAGAGATGGATATCAGATAGAGGACAAATTATAAAAGTACCATCTTACAAGTTCATTGCATTCAATGCAGGTCCTAGAAGTTGTACTGGTAAAAATATGAGCTTTATTCAAATGAAAATGGTTGCAGCTACAGTGTTGTGGAAATTTCATATAAAGGGGGTGGAAGGTCACTCTATTACTCCAAAAGTTTCTATCGTTCTTCGCATGAAACATGGATTTAAGGTCACAGTTAGCAAAAAGATTCATTTGATATAA 1515 0.3366 MSLFQYFSLFVAILFIFYNIWRWKKKEFIPNWPIIGMLPSILYNQSNIHDYVTLFLKHYGGTFHFKGPRFTNIANFIITSDPMNVHHITSKNFTNYGKGSDFHEIFEILGVGIFNLDSNEWKQERTVLHSIIKMKNIEIFHQKNIQKKLENCLLPFLDHQASKGVQVFDLQDILERFTFDIICTLLFGFDPNSLPYKFNELPDIGCLNAISLLEDMLLSRHYIPKCIWKLQKWLQIGQAKKNKVAEENLHQFIYNSISYYKGDEDVDESPSYLLKELMKEGSGNNEKAKEYIRDTTLNLLAAGNGTISSGLSWFFWLVSNHPIVEAKIIKEIKDNRLTQEENFVTNLSVEVLDKLVYLHAAICEALRLYPPLAFQHKCAIKDDILSSGDHVSPNTKLIYSLYAMGRMEQIWGEDCLEFKPERWISDRGQIIKVPSYKFIAFNAGPRSCTGKNMSFIQMKMVAATVLWKFHIKGVEGHSITPKVSIVLRMKHGFKVTVSKKIHLI* 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g2830 504 Pfam Cytochrome P450 30 495 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g2830 504 PRINTS E-class P450 group I signature 291 308 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g2830 504 PRINTS E-class P450 group I signature 311 337 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g2830 504 PRINTS E-class P450 group I signature 438 448 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g2830 504 PRINTS E-class P450 group I signature 448 471 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g2830 504 Gene3D Cytochrome P450 15 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g2830 504 PANTHER CYTOCHROME P450 FAMILY PROTEIN 11 497 - -
Tpr1g2830 504 SUPERFAMILY Cytochrome P450 30 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g2830 504 PANTHER CYTOCHROME P450 11 497 - -
Tpr1g2830 504 PRINTS P450 superfamily signature 302 319 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g2830 504 PRINTS P450 superfamily signature 360 371 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g2830 504 PRINTS P450 superfamily signature 439 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g2830 504 PRINTS P450 superfamily signature 448 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g2830 Tpr-Chr1 32572312 32574090 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g2830 9 504 Cytochrome P450 AT2G23180 41.961 8.34e-140 411
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g2830 - - cam:101494575 681.404