Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g2827 ATGACCTTTTTTCAATATACTATATTATTTTTAGCCACTAGTCTCTTCATCATTTTATACAATATATGGAGACGAAACAAAAATGTACTTTCACCAAATTGGCCAATAATTGGCATGCTACCATCACTTTTGTATAATCAATCCAATATGCATGATTTTACAACCCTACTTTTGAATCATTATGGTGGCACTTTTCATTTCAAAGGACCTTGGTTCACAAACATTGCCAACTTTACCCTCACCGGTGATCCCATGAATGTGCACCATATCCTCAGCAAGAATTTCAGCAACTATGGGAAAGGATCTGATTTCCATGAGATTTTTGATGTTCTTGGTGTTGGTATTTTCAATTTGGATTCTAATGAATGGAAACAAGAAAGGACATTACTTCATTCATTGCTCAGAAAGAAAAACTTTGAGATATTCAATCAACAAAACATTCAAAAGAAGCTAGAGCATTGCCTATTACCATTTCTTGATCAAGCATCCAAAGGTAAACAAGTAGTTGATTTACATAATGTTATTGAGAGATTCACCTTTGATATTACTTGTACTTTTATATTTGGATTCGATCCTAATTGTCTTGACAAGTTCGATGAGTTATCAGATGTTAATTCTTGTGTAAAAGCTATTTCTGTGATTGAGGATATGTTATTGTCTAGACACTGTATTCCAAAGTATATTTGGAAGCTTGAAAAATGGCTACAAATTGGTCAGGCTAGAAAGAACAAGGTAGCTCAAGAAAATGTTTATAAATTCTTATACAACTGTATATCTTCTTACCAAGATAATGAGGACGGAGACGAATCTCCTTCTTGCTTTTTAAAAGAACTAATGAAAGAAGGATTGGGAAAGGGAGAAATGACCAAGGAGTATATTCGAGACACAACAATCAATCTCTTGGCAGCAGGAAATGGAACAGTTAGTTCAGGTCTTAGTTGGTTCTTTTGGCTTGTTTCAACTCATCCTATTGCCGAAGCTAAAATTATTCAAGAGATCAAAGATAAATGTTTAACACAAGACGAGAATTTGATCGTAGATTTAAATGTTCAAGAGCTTGATAGGCTAGTTTACCTTCATGCAGCTATATGTGAAGCGTTAAGGCTTTATCCTCCTGTACCATTTGAACACAAGTGTGCAGTTAAATCTGATATACTACCGAGTGGAGACCATGTTACTCCAAATACAAAGTTAATATATTCTTTGTATGCGATGGGAAGGATGAAACAAATATGGGGAGAAGACTGCTTGGAATTTAAGCCGGAGAGATGGATATCAGATAAAGGGCAAATTATACAAGTGCCGTCTTATAAGTTCATTGCATTCAATGCAGGTCCAAGAAGTTGTATTGGGAAAGATATTACCTTTGTTCAAATGAGAATGGTTGCAGCTTCTATATTATGGAAGTTTCACATACAAGCAGTGGAAGGTCACTCTGTCATTCCAAGGGTTTCTATGGTTCTTCGTATGAAACATGGATTTAAGGTCAATGTCAGTAAAAGATGTATTTGA 1512 0.3492 MTFFQYTILFLATSLFIILYNIWRRNKNVLSPNWPIIGMLPSLLYNQSNMHDFTTLLLNHYGGTFHFKGPWFTNIANFTLTGDPMNVHHILSKNFSNYGKGSDFHEIFDVLGVGIFNLDSNEWKQERTLLHSLLRKKNFEIFNQQNIQKKLEHCLLPFLDQASKGKQVVDLHNVIERFTFDITCTFIFGFDPNCLDKFDELSDVNSCVKAISVIEDMLLSRHCIPKYIWKLEKWLQIGQARKNKVAQENVYKFLYNCISSYQDNEDGDESPSCFLKELMKEGLGKGEMTKEYIRDTTINLLAAGNGTVSSGLSWFFWLVSTHPIAEAKIIQEIKDKCLTQDENLIVDLNVQELDRLVYLHAAICEALRLYPPVPFEHKCAVKSDILPSGDHVTPNTKLIYSLYAMGRMKQIWGEDCLEFKPERWISDKGQIIQVPSYKFIAFNAGPRSCIGKDITFVQMRMVAASILWKFHIQAVEGHSVIPRVSMVLRMKHGFKVNVSKRCI* 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g2827 503 PRINTS E-class P450 group I signature 292 309 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g2827 503 PRINTS E-class P450 group I signature 312 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g2827 503 PRINTS E-class P450 group I signature 360 378 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g2827 503 PRINTS E-class P450 group I signature 439 449 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g2827 503 PRINTS E-class P450 group I signature 449 472 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g2827 503 PANTHER CYTOCHROME P450 17 498 - -
Tpr1g2827 503 SUPERFAMILY Cytochrome P450 32 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g2827 503 PRINTS P450 superfamily signature 303 320 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g2827 503 PRINTS P450 superfamily signature 361 372 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g2827 503 PRINTS P450 superfamily signature 440 449 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g2827 503 PRINTS P450 superfamily signature 449 460 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g2827 503 PANTHER CYTOCHROME P450 FAMILY PROTEIN 17 498 - -
Tpr1g2827 503 Pfam Cytochrome P450 32 497 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g2827 503 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 442 451 IPR017972 GO:0005506|GO:0016705
Tpr1g2827 503 Gene3D Cytochrome P450 16 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g2827 Tpr-Chr1 32518511 32520292 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g2827 1 501 Cytochrome P450 AT2G23180 41.440 6.02e-144 421
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g2827 - - cam:101494575 679.093