Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g2826 ATGCAGTTTTGTCCAAGTACAATGACAATGTTTCAATATATTACATTATTTATAGCCATTATTTTCTTCATAATCTACAATATATGGAGACGCAACAAAAATGTACTTACACCAAATTGGCCAATAGTTGGCATGCTACCATCACTTTTGCGTAATCTATCCAATATTCATGATTATGCAGCCTTAGTTTTAAAAAATAATGGCGGTACCTTTTATTTTAAAGGACCTTGGTTCACAAACATTGCCAACTTTGTCCTTACTAGTGACCCCATGAATGTGCACCACATCACTAGCAAGAATTTCAGCAATTATGGGAAGGGACCTGATTTCCCTGAAATTTTTGAAGTTCTTGGTGCTAGTATTATAACTTTGGATTCAAATGAATGGAAACAAGAGAGAACACTACTTCATTCATTGCTCAAAAAGAAAAGTTTTGAGACAACCCTTCAAAAGAATGTTCAAAGGAAGCTACAAAATTGCCTATTACCATTTCTTGATCACCATGCATCAAAAGGTGTACAAGTAATTGATTTACAAGATATTTTTGAGAGGTTTACTTTTGATATTACTTGTACTTTTTTATTTGGATTTGATCCAAATAGCTTTCCATATAATTTCAATGAGTTCGCAGAGATTGCTTATGTAAATGCTATTTCTGTGCTAGAGGATACAATATTGTTTAGGCAATGTATACCAAAATGTATGTGGAAGCTACAAAAATGGCTACAAATTGGTCAAGAGAAGAAAAACAAGGTAGCTTTGGAAAATCTTCACCAATTCTTGTTGAAGTGTATAATTTCCTCCAAAGGCAATGAAGAGGAAAGAAGATTGCGAAGTAGTGAAGATGTCGAAGAAAGTGACTCTCTCGGCTTGCTACAAGGAGTAATGAACAAAGCCGAATTAGGAAAGGAGCAAATGGATCAATATGAGAAGTATATTAGAGACACCGCAATCACTCTCTTAGCCGCAGGAAATGGAACAATTAGTTCTGGTCTCAGTTGGTTCTTTTGGCTTGTTTCAACTCATCCTATTGTAGAAGCTAAAATCATTCAAGAGATTAAAGATAATTTGCTAAAACTAAACGAGAATTTGATCGATAATTTAACAATGGAAAAGATTGATAAGCTAGTTTACCTACATGGAGTTATATGTGAAGCCTTGAGGCTTTACCCTCCTATACCATTTGAGTACAAGTGTGCAGTGAAATCAGATATACTACCTAGTGGAGACTATGTTAGTCCAAATTTAAAGCTAGTATACTCGTTGTACGCAATGGGAAGGATGAAACAAATATGGGGTGAGGATTGTTTGGAATTTAAGCCGGAGAGATGGATATCAGATAAAGGACAAATTATACATGTACCTTCTTACAAGTTCATAACATTCAATGCAGGTCCAAGAAGTTGTTTGGGAAAAGAAATTAGCTTTATACAAATGAAAATGGTTGCTGTTGCTGTCTTATGGAAGTTTCATGTTCAGGTGATAGAAGGTCACTCCATTGCTCCAAGAGTTTCTATGATTCTTCGTATGGAGCATGGATTTAAGGTCAATGTTAGTAAAAGATGCATTTGA 1572 0.3492 MQFCPSTMTMFQYITLFIAIIFFIIYNIWRRNKNVLTPNWPIVGMLPSLLRNLSNIHDYAALVLKNNGGTFYFKGPWFTNIANFVLTSDPMNVHHITSKNFSNYGKGPDFPEIFEVLGASIITLDSNEWKQERTLLHSLLKKKSFETTLQKNVQRKLQNCLLPFLDHHASKGVQVIDLQDIFERFTFDITCTFLFGFDPNSFPYNFNEFAEIAYVNAISVLEDTILFRQCIPKCMWKLQKWLQIGQEKKNKVALENLHQFLLKCIISSKGNEEERRLRSSEDVEESDSLGLLQGVMNKAELGKEQMDQYEKYIRDTAITLLAAGNGTISSGLSWFFWLVSTHPIVEAKIIQEIKDNLLKLNENLIDNLTMEKIDKLVYLHGVICEALRLYPPIPFEYKCAVKSDILPSGDYVSPNLKLVYSLYAMGRMKQIWGEDCLEFKPERWISDKGQIIHVPSYKFITFNAGPRSCLGKEISFIQMKMVAVAVLWKFHVQVIEGHSIAPRVSMILRMEHGFKVNVSKRCI* 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g2826 523 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 462 471 IPR017972 GO:0005506|GO:0016705
Tpr1g2826 523 Gene3D Cytochrome P450 31 522 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g2826 523 PRINTS E-class P450 group I signature 312 329 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g2826 523 PRINTS E-class P450 group I signature 332 358 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g2826 523 PRINTS E-class P450 group I signature 380 398 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g2826 523 PRINTS E-class P450 group I signature 459 469 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g2826 523 PRINTS E-class P450 group I signature 469 492 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g2826 523 PANTHER CYTOCHROME P450 18 518 - -
Tpr1g2826 523 Pfam Cytochrome P450 38 517 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g2826 523 PANTHER CYTOCHROME P450 FAMILY PROTEIN 18 518 - -
Tpr1g2826 523 SUPERFAMILY Cytochrome P450 26 521 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g2826 523 PRINTS P450 superfamily signature 323 340 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g2826 523 PRINTS P450 superfamily signature 381 392 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g2826 523 PRINTS P450 superfamily signature 460 469 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g2826 523 PRINTS P450 superfamily signature 469 480 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g2826 Tpr-Chr1 32512312 32514010 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g2826 8 521 Cytochrome P450 AT2G23180 40.962 6.74e-142 417
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g2826 - - cam:101494575 676.396