Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g2821 ATGAGTTCCAATTCTAAACAAAATAATAATCTTCCTACTAATGAGCTAGAAAAGGTTGATGATGCTTACCTTTCAGCATTGACATTATGTTTTAGTAGGATTTTTCCTGCAATATTAAATGCTGCTGTTGATCTCAATTTATTTGATATCATAGCTAAGTTACAAATTTCAAGTGGTAATAATTCTAGCTATTCTGCTTCTGAAATTGCTTATGAGCTTCCAAATCAACACCCTGAATTGGCTGAGAGGCTTGAACGCATGTTGACTGTTTTGGCTAGCTATTCTCTTCTCAATTGTTCAATCCGTACAAATGAAAATGGTAAGAGAGAAAGAGTTTTTGGTCTCTCTTCAATTGGTCGATACTTTGCAATTGATAAAGATGGAGGCTCTTTGGGTCCACTCTCAACATTAATCCATAGAGGATGTAACAGCGTTTGGGGTGATGTAAAGGAAGCAATTTTGGATCCTGGTGTGAAAACTCTTTTCCAAAGTATCAATGGGACACCATTTTATCAATATACAAAGACAAATAATGAATTGAATGATATTACTAACAAAGCAATGGCCCATGCTGGACCTTTAGAAATTAAAAGAATCCTCAAATTATACAAAGGATTTGAGGGAATCTTAACATTGGTTGATGTTGGAGGTGGATTTGGAGAGACCTTAAAATTCATTATATCTCAATATCCTTCAATTAAAGGAATTAATTTTGATTTGCAACAAGCTGTTCAAGACGCACCTTCTCATCCAGGGATAGAACACGTTGGAGGAGATATGTTTGAAAGTGTTCCAACTGGTGATGCCATTTTACTAAAGCTTGTATGTCATAATTGGGGAGATGAAGAATGTGTGAAGTTTTTAAAAAATTGTCACAAAGCTTTGCCAAAAAATGGGAAGGTAGTTATTTTGGATTATATAATTCCAGAGGTGCCAAATTCAAGCAATATGTCTAAGCATGTTTGTGATATTGACAATCTAATGTTTTTAGTAACAACTGGAAAGGAAAGAACTGAGGAAGAATTTAAGAGCTTATGTAAGAAATCTGGATTTTCTAAATTTCATGTTGCTTGCAGTGATGTTTCAGCCATGTCAGGAGTGATGGAATTTTATAAATAA 1119 0.3432 MSSNSKQNNNLPTNELEKVDDAYLSALTLCFSRIFPAILNAAVDLNLFDIIAKLQISSGNNSSYSASEIAYELPNQHPELAERLERMLTVLASYSLLNCSIRTNENGKRERVFGLSSIGRYFAIDKDGGSLGPLSTLIHRGCNSVWGDVKEAILDPGVKTLFQSINGTPFYQYTKTNNELNDITNKAMAHAGPLEIKRILKLYKGFEGILTLVDVGGGFGETLKFIISQYPSIKGINFDLQQAVQDAPSHPGIEHVGGDMFESVPTGDAILLKLVCHNWGDEECVKFLKNCHKALPKNGKVVILDYIIPEVPNSSNMSKHVCDIDNLMFLVTTGKERTEEEFKSLCKKSGFSKFHVACSDVSAMSGVMEFYK* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g2821 372 Pfam O-methyltransferase domain 146 352 IPR001077 GO:0008171
Tpr1g2821 372 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 1 372 - -
Tpr1g2821 372 ProSitePatterns Orn/DAP/Arg decarboxylases family 2 signature 2. 205 220 IPR022657 -
Tpr1g2821 372 PIRSF O-mtase 3 372 IPR016461 GO:0008168
Tpr1g2821 372 CDD AdoMet_MTases 211 308 - -
Tpr1g2821 372 Gene3D - 2 122 IPR036388 -
Tpr1g2821 372 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 27 372 IPR016461 GO:0008168
Tpr1g2821 372 Pfam Dimerisation domain 38 92 IPR012967 GO:0046983
Tpr1g2821 372 SUPERFAMILY "Winged helix" DNA-binding domain 19 123 IPR036390 -
Tpr1g2821 372 PANTHER O-METHYLTRANSFERASE 1 372 IPR016461 GO:0008168
Tpr1g2821 372 Gene3D Vaccinia Virus protein VP39 129 372 IPR029063 -
Tpr1g2821 372 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 142 360 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g2821 Tpr-Chr1 32421153 32423833 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g2821 20 358 Monolignol Biosynthesis Gene Families AT5G54160 45.455 5.28e-104 309
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g2821 - - aprc:113869089 519.235