Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g2817 ATGGACATACTCAACTCCATGCTCTTCGTTCTCTTCACCTTCATCTTCCTCAAATCCATCCATTTCCTTCTCTCAAAACACAAACCACCACTCCCACCAGGTCCACGTGGCCTCCCCATCATAGGCAACCTCCATCAACTAGGCCCAAACCCCCACAAAACCTTAACCAATCTCTCCAAAACCCATGGCCCAATAATGTCCCTAAAATTAGGCCAAATAACTACCATAGTTATGTCTTCACCAGAAACTGCCAAATCAGTTCTTCAAATCAATGACCAATTTCTTGCTAACAGAAAAGTACCTGATGGCATGAAAGGTGCTAACCACCATAATTATAGTTTACCATTTTTACCTATTTGTCAACGTTGGAAAGATTTAAGAAAAACATGTAACAACCTTTTATTTTCGAATAAAAACCTCGATTCCAATCAAGCACTTCGAAGCCAAAAGATTATAGAACTTTATGATGATATAAATGATAGTGCTAACAAATTTGAAGCAGTTAATATTGGAAGATTGGCTTTTAAGACAACTATTAATATGCTGTCAAATACGGTTTATTCGGTTGATTTGATTCAATCGAGTGATAAAGCCGGGGAGTTTAAGGAGTTGGTTACGAATATTATGAAGGAAGTTGGAAGACCTAATGTCGCCGATTGTTTTCCGGTTTTGAAGGTTTTGGATCCTATTGGGATTAGAGGAAGGGTTGGTGAGTATTTTGGGAAGTTGTTGGAAATTTTTGGTGAGATGGTGGATGAAAGGTTGAAGATGAGAGAGTTGAAAGGTTATTGTGGGAAAAGTGATATGTTGGATGCTATGCTTGATGATGAGAATAATATTGGGGAGAAGTACGAAGAAAAGATTGCACGTTTGTCTGTGGACTTGTTTGTAGCAGGAACTGACACAGTAACTTCAACAATAGAATGGGCAATGGCTGAATTACTTCGCAATCCAAAAGTTATGTCAAAAGCAAAATCAGAGTTAAACCAAATTATTGGTAAAGGAAATTTAGTTAAAGAATCAGACATAACAAAACTTCCTTATTTACAAGCAATAGTAAAAGAAACTTTTAGATTACATCCAGCAGTTCCACTTTTACTACCAAGAAAAGCTGAACATGACTTAGAAATTAATGGCTATAAAGTCCCAAAAAATGCACAAGTTTTAGTTAATGTTTGGGCTATTGGAAGAGATTCAAATACATGGGAAAATCCTAATGAATTTTTGCCTGAAAGATTTTTGGGGTCAGAAATTGATTTTAAAGGTAGAAATTTTGAGTTGGCACCATTTGGTAGTGGGAGAAGATTATGTCCTGGATTACCATTAGCTATAAGGATATTATTTTTGATGTTGGGTTTATTTATTAATTGTTTTGATTGGGAACTTAATGATGGGATTAAGGCTGAAGATATGAATATGGATGATAAATTTGGACTTACTTTGGAGAAGGCTCAAGCTTTGTTAGCTGTCCCAATTAAAGTAACATGA 1488 0.3602 MDILNSMLFVLFTFIFLKSIHFLLSKHKPPLPPGPRGLPIIGNLHQLGPNPHKTLTNLSKTHGPIMSLKLGQITTIVMSSPETAKSVLQINDQFLANRKVPDGMKGANHHNYSLPFLPICQRWKDLRKTCNNLLFSNKNLDSNQALRSQKIIELYDDINDSANKFEAVNIGRLAFKTTINMLSNTVYSVDLIQSSDKAGEFKELVTNIMKEVGRPNVADCFPVLKVLDPIGIRGRVGEYFGKLLEIFGEMVDERLKMRELKGYCGKSDMLDAMLDDENNIGEKYEEKIARLSVDLFVAGTDTVTSTIEWAMAELLRNPKVMSKAKSELNQIIGKGNLVKESDITKLPYLQAIVKETFRLHPAVPLLLPRKAEHDLEINGYKVPKNAQVLVNVWAIGRDSNTWENPNEFLPERFLGSEIDFKGRNFELAPFGSGRRLCPGLPLAIRILFLMLGLFINCFDWELNDGIKAEDMNMDDKFGLTLEKAQALLAVPIKVT* 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g2817 495 PANTHER CYTOCHROME P450 FAMILY PROTEIN 1 494 - -
Tpr1g2817 495 PRINTS E-class P450 group I signature 59 78 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g2817 495 PRINTS E-class P450 group I signature 287 304 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g2817 495 PRINTS E-class P450 group I signature 307 333 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g2817 495 PRINTS E-class P450 group I signature 350 368 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g2817 495 PRINTS E-class P450 group I signature 391 415 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g2817 495 PRINTS E-class P450 group I signature 427 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g2817 495 PRINTS E-class P450 group I signature 437 460 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g2817 495 PRINTS P450 superfamily signature 298 315 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g2817 495 PRINTS P450 superfamily signature 351 362 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g2817 495 PRINTS P450 superfamily signature 428 437 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g2817 495 PRINTS P450 superfamily signature 437 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g2817 495 SUPERFAMILY Cytochrome P450 23 487 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g2817 495 Gene3D Cytochrome P450 23 490 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g2817 495 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 430 439 IPR017972 GO:0005506|GO:0016705
Tpr1g2817 495 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 1 494 - -
Tpr1g2817 495 Pfam Cytochrome P450 32 484 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g2817 Tpr-Chr1 32336117 32338700 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g2817 1 493 Cytochrome P450 AT2G45550 46.562 8.96e-165 474
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g2817 - - lja:Lj2g3v0039250.1 638.262