Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g2814 ATGGATGTTGTTGGAATCAGCAATGATGAACAGGAAGCTATATTTCGAACAGTAGCCGCTGTACTTCATTTAGGAAATATTGAATTTGTTAAAGCAATGGATGAAGGGACGGATTCCTCTAAACCTAAGGACGATAAATCTTATTTCCATTTGAAAACTGCAGCTGAACTTTTGATGTGTGATGAAAAGTCCCTTGAAGATTCATTTTGCAAACGAGTTATGGTGACTCGTGGTGATACGATAACAAAATGTCTTGATCCAGACTCTGCAGCTCTAAGTAGAGATGCATTGGCTAAAATAGTTTATTCAAGACTTTTTGACTGGATTGTGGACAAGATTAACAACTCTATTGGTCAAGATGCAAATTCAAAGAGCTTAATTGGCGTTCTAGATATATACGGATTTGAGAGTTTCAAGACAAACAGTTTCGAGCAATTTTGTATCAACTTGACAAATGAGAAGTTACAGCAACATTTCAACCAGCATGTCTTCAAAATGGAGCAAGAGGAATATACAAAGGAGGAGATTGATTGGAGTTATATCGAGTTCGTTGATAATCAAGATGTTCTTGATCTTATTGAGAAGAAACCTGGTGGTGTTATTGCTCTTCTCGATGAGGCCTGTATGTTTCCAAGATCAACGCACGAAACATTTGCTGAAAAGCTATATCAAACACTTAGTAGCAATAAACGCTTCAGCAAGCCAAAGTTGTCGCGAACTGGTTTCACAATCAATCACTATGCCGGTGATGTCACTTATCAAACCGACCTATTCCTTGATAAAAACAAAGACTATGTTGTTCCTGAGCATGCTGCGCTGCTCAGTGCTTCCAATTGCCCTTTTGTTTCAGGACTTTTCCCACCTTTACCTGAGGAAACTATGAAATCAACGAAATTCTCATCCATAGCCACTCAGTTTAAGCAACAACTGCAATCTTTGCTTGAAACATTGAATGCCACTGAGCCACACTACATTCGTTGCGTAAAGCCAAATAATCTTCTTAAACCAGGGATATTCGAGAACAACGATGTGTTGCAGCAGCTTCGATGTGGAGGTGTAATGGAGGCAATTAGGATAAGTTGTGCTGGATATCCAACTAGAAAGACGTTCGATGAATTTGTTCAGCGGTTTACTATATTGGACCCTAAGGGGTTAAAATCATGCCCTGATGAGATGACTGCTTGCAAGATGCTTCTAGATAAAGCAAATCTTAAAGGTTATCAGGTTGGAAAGACAAAAGTGTTTTTGAGGGCAGGTCAAATGGCAGAACTAGATGCATGCCGTGCTGAGGTCCTAGGAAGATCTGCAATCGTTATTCAGAAAAAAGCTCGCACGTATATTTGTGAGAAAAAGTACAAATTAATGCGATTCTCTGCCACACAAGTACAAAGGGCTGTTAGAGGACAACTTGCAAGACTTTGTTACGAACGCATGAGAAGAGAGGCTGCCTCTTTGATAATTCAGAAACAATGCCGCATGTATCTTTCGAGAAGTGCTTATAAAACTACCTATGCTAGAGCTATTTGTATTCAAACCGGCATGCGAGGGATGGCTGCTAGAAATGAACTTAGATTCAGGAGGCGGACAAAAGCTGCAATTAAAATTCAGGGTCGATACAGATGTCATCGAGCTCGGACTTATTACAAAAGGCTAAAGAGAGCAACAATTGCAGTACAATGTTCGTGGAGGCGAACAAGAGCACGACGAGAACTTCGGAAGCTTAGAATGGCTGCTAAGGAATCCAAGGCCCTAGAAGCCGCGAAACAAAATCTAGAAAAGCAAGTTGAGGAACTAATTTCGACTCTAGAATCAGAGAAGAGAATGAGGGAAGCCAAGACACAGGAAAATGAAAAATTACAACATGCTTTGGAAGAGATGGAGATTCGGTTCGAAGAAACTAAAACAAAACTCACTCAGGAATTCGAAGAAACTAAAACGAAACTCACTCAGGAATGTGAGGCTGCGAAGAAAGTAGCTGAGCAAACACCAACTATACATGAAAATGAAAATAATGTTGCTGACAGCGAATTGATAAATAAGCTTACTGCAGAGAATGAAAAACTCAAGGAGCTTGTTAATTCAATGGAAAAGAAAACTAAACTGGAGATTCCTGATAATCTTACTGACAATGAAGTGATTAATAAGCTTGCTGAAGAAAATGGACAACTCAAGGACCTTGTTAATTCAATGGAAAAGAAAACTAAACTGGAGCTTCCTGATAATGTTACTGACAATGAAGCGATTAATAAGCTTACTGAAGAAAATGAAAAACTCAAGGAGCTTGTTAGTTCATTGGAAGAGAAAACTAAAGACCAGATTCCTGCCCATTTTACTGAGAATGAAGTGATTAGTAAGCTTACAGAAGATAAAGAACATCTTAAGGATCAGGTTAAATCATTGGAACAGAAAGTTGATGAGACAGAGAAGAAATATGAAGAATGTAGCCGGCAAAGCGAGGACCGCATGAATCAAATTATAGAGACAGAATCAAAGATGATTGAGCTAAAGACAAAATTGCAGAAGCTTGAAGAAAAATTTTCTGATTTGGAATCTGAGAATCAAATTTTTCGGAAGCAAGCGCTGTTGAGTTCAACATCTCAGAGAATGACTGACAAAGTAGCCGCAATTCCGCCTTTGGAAAATGGTCAACAGGCACCAGTAAAAACACTTAATTCAACAGAAACTGTGAGGAGATCTCATATGGAGAGACATCAAGAAAGTGTAGAGCTTCTTTTCAAATGTGTGACAAAAGATCTTGGATTCTGTGAAGGGAAACCTGTTGCAGCATTTACCCTTTATAACTGTTTACTACATTGGAAATCGTTTGAAGCAGAAAAGACAAGTATATTTGATCGTCTTATTCAGCTTATTGGTTCTGCAATAGAGGATCAGGATAATAACAATTGTATGGCTTATTGGCTCTCGAATACATCTGCTTTGTTTTTCCACCTGCAACGATGTCTAAGAGTACCAGCACGAAAACCACCCACTCCAACAGGGTTTTTCGGGAGGATGACACAGGGTTTCCGCTCATCCAATAGTCTTTCCGGTGGTGCATTTGATGTAGTGCAACAAGTTGATGCAAAGTATCCAGCTTTGCTGTTCAAGCAACAACTTGCAGCTTATGTAGAAAAGATATATGGAATTGTTCGAGAAAATATGAAGAAAGAATTCTCCCCTCTGCTTTCTTCTTGCATCAAGGATCCCAAAGACAGCAACAGCCAACCAACTGGTTCATGGCATGACATTACTGAATGCCTTAATAAATTTCTCAATGTTTTGAAAGAAAATTATGTGCCTCCCGTTCTAATTCAAAAGGTATTTAATCAGACTTTTCAATACATCAACGCAGAAATCTTTAACAGCCTTATATTGCATAAAGAATGTTGCACACTCAACAATGGAGAATACGTAAAATCAGGGTTAGCTGAACTAGAACAATGGTGTAATGAAGTAACCGAAGAGTATGCTGGCACATCTTTGGATGAACTCAACCATTCAAAACAAGCAGTTAGATTCATGGTTTCTGAAAAGAAGGATGAACTATCCTATGATGATCTTACAAATGACATCTGCCCTGTGCTGAGTTCTCAACAGCTTTATAGAATATGTACACTATTCTTGGATGAAAATGACAATACCAAAAGTGTATCAAGTGATGTCACTACTAGATTAAAGCTTCTAATGACAGATGATGTAGCTGATGATGACAAATCCTTCTTATTAGAAGACAATTCAAGTGTTCCTATTATTGTTGAAGAGATTTCTCATACAAATATAGATAAGACAGTTCCAAAAATAAAACCACCTGCAGAACTACTTGAGAGTGCAAACTTCCAATTTTTACATGATTATAGTTAA 3861 0.3833 MDVVGISNDEQEAIFRTVAAVLHLGNIEFVKAMDEGTDSSKPKDDKSYFHLKTAAELLMCDEKSLEDSFCKRVMVTRGDTITKCLDPDSAALSRDALAKIVYSRLFDWIVDKINNSIGQDANSKSLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYTKEEIDWSYIEFVDNQDVLDLIEKKPGGVIALLDEACMFPRSTHETFAEKLYQTLSSNKRFSKPKLSRTGFTINHYAGDVTYQTDLFLDKNKDYVVPEHAALLSASNCPFVSGLFPPLPEETMKSTKFSSIATQFKQQLQSLLETLNATEPHYIRCVKPNNLLKPGIFENNDVLQQLRCGGVMEAIRISCAGYPTRKTFDEFVQRFTILDPKGLKSCPDEMTACKMLLDKANLKGYQVGKTKVFLRAGQMAELDACRAEVLGRSAIVIQKKARTYICEKKYKLMRFSATQVQRAVRGQLARLCYERMRREAASLIIQKQCRMYLSRSAYKTTYARAICIQTGMRGMAARNELRFRRRTKAAIKIQGRYRCHRARTYYKRLKRATIAVQCSWRRTRARRELRKLRMAAKESKALEAAKQNLEKQVEELISTLESEKRMREAKTQENEKLQHALEEMEIRFEETKTKLTQEFEETKTKLTQECEAAKKVAEQTPTIHENENNVADSELINKLTAENEKLKELVNSMEKKTKLEIPDNLTDNEVINKLAEENGQLKDLVNSMEKKTKLELPDNVTDNEAINKLTEENEKLKELVSSLEEKTKDQIPAHFTENEVISKLTEDKEHLKDQVKSLEQKVDETEKKYEECSRQSEDRMNQIIETESKMIELKTKLQKLEEKFSDLESENQIFRKQALLSSTSQRMTDKVAAIPPLENGQQAPVKTLNSTETVRRSHMERHQESVELLFKCVTKDLGFCEGKPVAAFTLYNCLLHWKSFEAEKTSIFDRLIQLIGSAIEDQDNNNCMAYWLSNTSALFFHLQRCLRVPARKPPTPTGFFGRMTQGFRSSNSLSGGAFDVVQQVDAKYPALLFKQQLAAYVEKIYGIVRENMKKEFSPLLSSCIKDPKDSNSQPTGSWHDITECLNKFLNVLKENYVPPVLIQKVFNQTFQYINAEIFNSLILHKECCTLNNGEYVKSGLAELEQWCNEVTEEYAGTSLDELNHSKQAVRFMVSEKKDELSYDDLTNDICPVLSSQQLYRICTLFLDENDNTKSVSSDVTTRLKLLMTDDVADDDKSFLLEDNSSVPIIVEEISHTNIDKTVPKIKPPAELLESANFQFLHDYS* 1287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g2814 1286 Coils Coil 564 658 - -
Tpr1g2814 1286 Coils Coil 713 733 - -
Tpr1g2814 1286 Coils Coil 783 817 - -
Tpr1g2814 1286 Gene3D Kinesin motor domain 120 359 IPR036961 -
Tpr1g2814 1286 ProSiteProfiles IQ motif profile. 505 532 IPR000048 GO:0005515
Tpr1g2814 1286 ProSiteProfiles IQ motif profile. 455 484 IPR000048 GO:0005515
Tpr1g2814 1286 CDD MyosinXI_CBD 902 1253 IPR037975 GO:0007015
Tpr1g2814 1286 ProSiteProfiles Dilute domain profile. 951 1231 IPR002710 -
Tpr1g2814 1286 Coils Coil 741 771 - -
Tpr1g2814 1286 PANTHER MYOSIN 1 1283 - -
Tpr1g2814 1286 PRINTS Myosin heavy chain signature 126 154 IPR001609 GO:0003774|GO:0005524|GO:0016459
Tpr1g2814 1286 PRINTS Myosin heavy chain signature 179 207 IPR001609 GO:0003774|GO:0005524|GO:0016459
Tpr1g2814 1286 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 482 579 IPR027417 -
Tpr1g2814 1286 SMART MYSc_2a 1 430 IPR001609 GO:0003774|GO:0005524|GO:0016459
Tpr1g2814 1286 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 482 IPR027417 -
Tpr1g2814 1286 Gene3D - 364 427 - -
Tpr1g2814 1286 PANTHER MYOSIN HEAVY CHAIN 1 1283 - -
Tpr1g2814 1286 Gene3D - 530 579 - -
Tpr1g2814 1286 Gene3D - 483 529 - -
Tpr1g2814 1286 Gene3D - 432 482 - -
Tpr1g2814 1286 Pfam DIL domain 1107 1207 IPR002710 -
Tpr1g2814 1286 SMART iq_5 479 501 IPR000048 GO:0005515
Tpr1g2814 1286 SMART iq_5 454 476 IPR000048 GO:0005515
Tpr1g2814 1286 SMART iq_5 431 453 IPR000048 GO:0005515
Tpr1g2814 1286 SMART iq_5 527 549 IPR000048 GO:0005515
Tpr1g2814 1286 SMART iq_5 550 572 IPR000048 GO:0005515
Tpr1g2814 1286 SMART iq_5 502 524 IPR000048 GO:0005515
Tpr1g2814 1286 Pfam IQ calmodulin-binding motif 529 549 IPR000048 GO:0005515
Tpr1g2814 1286 Pfam IQ calmodulin-binding motif 482 501 IPR000048 GO:0005515
Tpr1g2814 1286 Pfam IQ calmodulin-binding motif 434 453 IPR000048 GO:0005515
Tpr1g2814 1286 Gene3D Myosin VI head, motor domain, U50 subdomain 7 298 - -
Tpr1g2814 1286 ProSiteProfiles IQ motif profile. 551 580 IPR000048 GO:0005515
Tpr1g2814 1286 Coils Coil 825 859 - -
Tpr1g2814 1286 Pfam Myosin head (motor domain) 1 417 IPR001609 GO:0003774|GO:0005524|GO:0016459
Tpr1g2814 1286 ProSiteProfiles IQ motif profile. 480 506 IPR000048 GO:0005515
Tpr1g2814 1286 SMART DIL_2 1106 1213 IPR002710 -
Tpr1g2814 1286 Gene3D - 136 320 - -
Tpr1g2814 1286 ProSiteProfiles IQ motif profile. 528 557 IPR000048 GO:0005515
Tpr1g2814 1286 Coils Coil 678 698 - -
Tpr1g2814 1286 ProSiteProfiles Myosin motor domain profile. 1 429 IPR001609 GO:0003774|GO:0005524|GO:0016459
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g2814 Tpr-Chr1 32270640 32282124 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g2814 1 1284 Myosins gene family AT1G04600 54.387 0.0 1448
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g2814 K10357 - gmx:100788123 1892.09