LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Tpr1g2813	ATGATAAATGAAGAAAGAAGCCAAGCTATTTTGGTTAGTGGAGAAAGTGGAGCTGGTAAAACAGAAAGTACAAAGATGCTTATGCATTATCTTGCCTATTTAGGAGGGAGAGCAGCAACTGAGGGAAGGTCTGTGGAGCAACAAGTTCTAGAGTCCAATCCTGTTTTAGAAGCATTTGGGAATGCAAAGACTGTTAGGAATAATAATTCAAGTCGTTTTGGTAAGTTTGTGGAGATTCAGTTTGATCAAAAGGGGAGAATTTCAGGAGCTGCTATCAGAACTTATTTGCTGGAACGATCACGTGTTTGTCAAGTTTCTGATCCTGAGAGAAACTATCATTGTTTTTATATGCTTTGTGCTGCACCACAAGAGGTACACAATGATTTCTACCTTTATTATGGATACAAGTTGCTTGCACAAAGTTGA	426	0.385	MINEERSQAILVSGESGAGKTESTKMLMHYLAYLGGRAATEGRSVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDQKGRISGAAIRTYLLERSRVCQVSDPERNYHCFYMLCAAPQEVHNDFYLYYGYKLLAQS*	142

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Tpr1g2813	141	Gene3D	Kinesin motor domain	1	141	IPR036961	-
	Tpr1g2813	141	PRINTS	Myosin heavy chain signature	7	32	IPR001609	GO:0003774\|GO:0005524\|GO:0016459
	Tpr1g2813	141	PRINTS	Myosin heavy chain signature	54	81	IPR001609	GO:0003774\|GO:0005524\|GO:0016459
	Tpr1g2813	141	ProSiteProfiles	Myosin motor domain profile.	1	141	IPR001609	GO:0003774\|GO:0005524\|GO:0016459
	Tpr1g2813	141	Pfam	Myosin head (motor domain)	1	129	IPR001609	GO:0003774\|GO:0005524\|GO:0016459
	Tpr1g2813	141	SMART	MYSc_2a	1	141	IPR001609	GO:0003774\|GO:0005524\|GO:0016459
	Tpr1g2813	141	PANTHER	MYOSIN-9	2	131	-	-
	Tpr1g2813	141	PANTHER	MYOSIN	2	131	-	-
	Tpr1g2813	141	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	1	133	IPR027417	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Tpr1g2813	Tpr-Chr1	32269649	32270425	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Tpr1g2813	1	124	Myosins gene family	AT1G04600	92.742	8.45e-77	245

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Tpr1g2813	K10357		-	gmx:100788123	243.817