Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g2798 ATGTTGTTTCATAATTTCCATGAAATGTGGAAACCAGTTTTGGTTATGATTATAGTTAATTTAGCTTTAGCCTTTGTCAATGTATTTCTGAAGAAGGTTCTTAGTGAAGGAATGGATCAGTTAACCATTTTAACATATCGACAAGCAATTGCAGCCATTTTCTTGGCACCAATTGCTTGCATCTTTGAAAGGGAAAGCAAGATAAATGGTCATGTAATATGTCTCCTTTTCTTTAGTGCTCTTGTAGGAGCAACACTCACTCAATACCTCTTTCTTGTTGGACTTGAATATACATCGGCAACATTCTCATGTGCATTCCTCAATACGGTGCCTGTATTCACGTTCATTATGGCACTCCCAATGGGGATGGAGAAAGTGAACATGAAAAACAAGAGTGGTAAAGCCAAAATCTTGGGAACTTTGGTGTGTATTGGTGGAGCTTTGGTATTGATCCTTTATAAAGGAATGCCCATAATCAACCCACAATATCATCCCATAGAAGACAAAGCCACAACAACATCAGCAGCAACATCAAACTTAAAGAAATGGATTATAGGTTCAATATTTCTAACTGCAGGTTGCCTCTTGTGGTCTTCATGGTTTCTTATACAAGAAAGGGTTGGCAAAAAGTATCCATATCAATACTCTAGTACAGCCATTTTGTCATTCTTTGCTACTATTCAATCAGCAATATTAAATTTGATCATCCATAGAAACAATGCCAAATGGATTCTCAAAGGAAAGCTACAAATATTGACTGTTGTATATTCTGGGCTGGTGGGAACAGGATTGTGCTATGTGGCAATGGCATGGTGTGTCAAACAAAGGGGTCCAGTTTTTACTGCAGCATTTACCCCGCTTTTACAGATGTTTGTGGCCGTGCTTGATCTCTGGTTATTAAAAGAGGAAATTTATCTAGGAAGTGTTGTAGGATCAGTCTTGGTTATTTCTGGGATGTATATGCTCCTATGGGGTAAAAGTAAAGATAGAGGAGAGTGTGCCTTGAAGGACACTCAAGAAAATCAAAAAGATGAAGAATGTCACTAA 1047 0.3782 MLFHNFHEMWKPVLVMIIVNLALAFVNVFLKKVLSEGMDQLTILTYRQAIAAIFLAPIACIFERESKINGHVICLLFFSALVGATLTQYLFLVGLEYTSATFSCAFLNTVPVFTFIMALPMGMEKVNMKNKSGKAKILGTLVCIGGALVLILYKGMPIINPQYHPIEDKATTTSAATSNLKKWIIGSIFLTAGCLLWSSWFLIQERVGKKYPYQYSSTAILSFFATIQSAILNLIIHRNNAKWILKGKLQILTVVYSGLVGTGLCYVAMAWCVKQRGPVFTAAFTPLLQMFVAVLDLWLLKEEIYLGSVVGSVLVISGMYMLLWGKSKDRGECALKDTQENQKDEECH* 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g2798 348 PANTHER WAT1-RELATED PROTEIN 10 348 IPR030184 GO:0016021|GO:0022857
Tpr1g2798 348 SUPERFAMILY Multidrug resistance efflux transporter EmrE 248 328 - -
Tpr1g2798 348 SUPERFAMILY Multidrug resistance efflux transporter EmrE 46 154 - -
Tpr1g2798 348 Pfam EamA-like transporter family 185 323 IPR000620 GO:0016020|GO:0016021
Tpr1g2798 348 Pfam EamA-like transporter family 11 151 IPR000620 GO:0016020|GO:0016021
Tpr1g2798 348 PANTHER WAT1-RELATED PROTEIN 10 348 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g2798 Tpr-Chr1 32147298 32150182 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g2798 8 257 Nodulin-like Gene Family AT3G30340 46.825 3.24e-80 244
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g2798 - - gmx:100794199 533.872