Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g2794 ATGTCTAACTGCAAGGAAACAACAACAACTAACGCCGTCGAACCCACAACAAACCAAACCGTTAAAAAACCGCCGTCAAAAGACCGTCACAGCAAAGTTGACGGACGTGGAAGAAGAATACGCATGCCAATAATATGCGCCGCACGTGTTTTTCAGTTAACACGTGAGTTAGGTCATAAATCCGACGGTCAAACTATTGAATGGCTTCTCCGTCAAGCTGAACCGTCGATTATCGCCGCTACCGGTACCGGAACTACTCCTGCTTCTTTCTCTTCTCTTTCTGAGCATAAACCTTTTCTTCCTCCTTCTCCTTTCATTCTCGGTAAACGGTTAAGGTCTGAACATGATGAACCTGTTTCTATTGCTGCACCCACTGCTCCGCCTGGTATATGGCGCCCGGATTTTGCTCAGCTTTGGAGTTTTGCTGCTGCTCAACCTCCGCCGGAAGTTCTTTCTATTTCTCCGCATCAGCAACAACATCAGCATAATTCGTTGTTTCATCATCAACAGCAGCAACAACAGCAGAATCAGCACCATCAGCATCAACAGCAAGGTTCTATGGGAGAAGCTTCCGCGGCGAGGTTAGGGAATTATCTTCCTGGACATTTGAATTTGCTTGCTTCGTTGTCTGGTGGTAATGGTAATTCTGGCCGCGGTGACGATGAGGATCGTTGA 675 0.4711 MSNCKETTTTNAVEPTTNQTVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSSLSEHKPFLPPSPFILGKRLRSEHDEPVSIAAPTAPPGIWRPDFAQLWSFAAAQPPPEVLSISPHQQQHQHNSLFHHQQQQQQQNQHHQHQQQGSMGEASAARLGNYLPGHLNLLASLSGGNGNSGRGDDEDR* 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g2794 224 MobiDBLite consensus disorder prediction 1 36 - -
Tpr1g2794 224 MobiDBLite consensus disorder prediction 151 190 - -
Tpr1g2794 224 PANTHER TRANSCRIPTION FACTOR TCP FAMILY-RELATED 1 175 - -
Tpr1g2794 224 PANTHER TRANSCRIPTION FACTOR TCP FAMILY-RELATED 177 220 - -
Tpr1g2794 224 MobiDBLite consensus disorder prediction 1 22 - -
Tpr1g2794 224 ProSiteProfiles TCP domain profile. 26 80 IPR017887 -
Tpr1g2794 224 MobiDBLite consensus disorder prediction 205 224 - -
Tpr1g2794 224 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 1 175 IPR005333 GO:0003700
Tpr1g2794 224 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 177 220 IPR005333 GO:0003700
Tpr1g2794 224 MobiDBLite consensus disorder prediction 149 196 - -
Tpr1g2794 224 Pfam TCP family transcription factor 26 184 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g2794 Tpr-Chr1 32121530 32123552 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g2794 13 224 TCP Transcription Factor Family AT5G23280 57.500 4.83e-74 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Tpr1g2794 TCP 6e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g2794 K16221 - gmx:100786264 241.891