Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g2793 ATGAATCAAATGTTTTCTTGCTTGGTTTTAATAATTCTATCTATTTTATCATTGGCTTCATCTCTTCAAGTTGGTTTCTATGGCTATACATGTCCATCTGCTGAGGAAATTGTGAGAAGTACTGTTAACAAGGCTGTTTCACTCAATCCTGGCATAGGTGCTGGATTGATCAGAATGCATTTTCATGATTGCTTTGTGAGGGGTTGTGATGCTTCTGTGTTACTAGTATCAACACCGGGAAATATAGCCGAAAGAGATAACTTTATCAACAATCCAAGTTTACGTGGCTTCGATGTAATCAACGAGGCCAAGGCTCAATTAGAATCCGCATGTCCGCAAACAGTATCGTGTGCAGACATTCTTACCTTCGCAACACGAGACAGCGTTTTCAAACTCAGTGGTGGCACGATAAACTACGATGTGCCATCAGGACGAAGAGACGGTCGTATCTCAATCGCTGATGAAGTGCCAAAAAATCTACCTGGACCTTCTTTCAACGCAGACCAACTTATCGCAAATTTCGCACAAAAAGGTTTGTCGGCCGATGAAATGGTTACACTCTCAGGAGCACATTCAATTGGTGCATCACATTGTTCTTCATTTTCTAATCGTTTATATTCATTTAGTGGTGCAAATTCTCAAGATCCTTCTTTGGATCCTTCATATGTTGAATCTTTGAAAACACAGTGTCCACCACCACCAAGTAGCAATGATCCATTAGTAGTGCTTGATGTTACTACTCCTAATCGTTTGGATAACGTGTACTATCAAGGATTGATTAATCACCATGGTTTGTTTACTTCAGATCAAACACTATTAAGTAGTCAATCTACACAAGAAAGTGTGCTAAGTAATGCTAATTATGGTTCAAATTGGGTTAACAAGTTTGCACAAGCAATGGTGCATATGGGTTCTATTGATGTGTTAAGTGGCTATGATGGTGAGATTAGGAAGCATTGCAGCTTTGTCAATTAG 975 0.3938 MNQMFSCLVLIILSILSLASSLQVGFYGYTCPSAEEIVRSTVNKAVSLNPGIGAGLIRMHFHDCFVRGCDASVLLVSTPGNIAERDNFINNPSLRGFDVINEAKAQLESACPQTVSCADILTFATRDSVFKLSGGTINYDVPSGRRDGRISIADEVPKNLPGPSFNADQLIANFAQKGLSADEMVTLSGAHSIGASHCSSFSNRLYSFSGANSQDPSLDPSYVESLKTQCPPPPSSNDPLVVLDVTTPNRLDNVYYQGLINHHGLFTSDQTLLSSQSTQESVLSNANYGSNWVNKFAQAMVHMGSIDVLSGYDGEIRKHCSFVN* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g2793 324 ProSitePatterns Peroxidases active site signature. 53 64 IPR019794 GO:0004601
Tpr1g2793 324 PRINTS Haem peroxidase superfamily signature 53 67 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr1g2793 324 PRINTS Haem peroxidase superfamily signature 115 132 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr1g2793 324 PRINTS Haem peroxidase superfamily signature 135 147 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr1g2793 324 PRINTS Haem peroxidase superfamily signature 183 198 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr1g2793 324 PRINTS Haem peroxidase superfamily signature 244 259 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr1g2793 324 Gene3D - 25 324 - -
Tpr1g2793 324 SUPERFAMILY Heme-dependent peroxidases 22 324 IPR010255 GO:0004601|GO:0006979|GO:0020037
Tpr1g2793 324 PANTHER PEROXIDASE 25-RELATED 15 322 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr1g2793 324 Gene3D Peroxidase, domain 2 161 303 - -
Tpr1g2793 324 Pfam Peroxidase 38 284 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr1g2793 324 ProSiteProfiles Plant heme peroxidase family profile. 21 324 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr1g2793 324 PANTHER PEROXIDASE 15 322 - -
Tpr1g2793 324 PRINTS Plant peroxidase signature 31 50 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr1g2793 324 PRINTS Plant peroxidase signature 55 75 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr1g2793 324 PRINTS Plant peroxidase signature 95 108 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr1g2793 324 PRINTS Plant peroxidase signature 114 124 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr1g2793 324 PRINTS Plant peroxidase signature 182 194 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr1g2793 324 PRINTS Plant peroxidase signature 242 257 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr1g2793 324 PRINTS Plant peroxidase signature 258 275 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr1g2793 324 PRINTS Plant peroxidase signature 298 311 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr1g2793 324 CDD secretory_peroxidase 23 323 IPR033905 GO:0004601|GO:0042744
Tpr1g2793 324 ProSitePatterns Peroxidases proximal heme-ligand signature. 183 193 IPR019793 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g2793 Tpr-Chr1 32110317 32112066 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g2793 5 324 Peroxidase AT4G11290 45.706 1.07e-90 272
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g2793 K00430 - gmx:100786791 446.432