Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g2789 ATGGCACTTCCAACAAATATTAGGGTTCTTGTGATTGATCATGATATCAATCTTCTCAATGCTATTGAGAAACTATGCTATCAATTCAATTATTCAGTCAAAACATGCTCCAATGTTTCGGATGCTTTTAATCTTTTGTTGGGAAAAAAAGATATTTTTGATTTGGTGTTAATTGAAGCTAAAATGCCCGACATGGATTCGTATGGATTTTTGCGACATGTTACACAACAAATCAACATCCCTGTTATTATGATGTGTGCTGATGGCTCAACAAGTGTTGTGATGAAGGCTATTGAGGATGGAGCTTGTGATTACTGGATCAAACCTTTGACCGAGAGTCTAATTATGAACATGTGGCAACATGTTGCAAGAAAACTTTGGAAGGAAAATAAAAACTTAGAATTAATGAGTGAAAAATTGCCGTTAATTGATCAAAAGATAGAAGAAGTGATCAACACTAGTGTGAAAAAAGGGAGTGTTGAAAAGAATAATGACAAACTCGGATCATCAACAAAGAAGAAACGTCTTAAATGGTCACCTGAGTTAAAAAGAAAAGGCAACACCCAAAAAAATTCTTGCAATGATGAATGA 591 0.3435 MALPTNIRVLVIDHDINLLNAIEKLCYQFNYSVKTCSNVSDAFNLLLGKKDIFDLVLIEAKMPDMDSYGFLRHVTQQINIPVIMMCADGSTSVVMKAIEDGACDYWIKPLTESLIMNMWQHVARKLWKENKNLELMSEKLPLIDQKIEEVINTSVKKGSVEKNNDKLGSSTKKKRLKWSPELKRKGNTQKNSCNDE* 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g2789 196 CDD REC_typeB_ARR-like 9 123 - -
Tpr1g2789 196 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR14 6 184 - -
Tpr1g2789 196 ProSiteProfiles Response regulatory domain profile. 8 123 IPR001789 GO:0000160
Tpr1g2789 196 MobiDBLite consensus disorder prediction 158 196 - -
Tpr1g2789 196 PANTHER TWO-COMPONENT RESPONSE REGULATOR 6 184 IPR045279 GO:0009736
Tpr1g2789 196 MobiDBLite consensus disorder prediction 159 196 - -
Tpr1g2789 196 Pfam Response regulator receiver domain 9 118 IPR001789 GO:0000160
Tpr1g2789 196 SUPERFAMILY CheY-like 5 137 IPR011006 -
Tpr1g2789 196 SMART REC_2 7 119 IPR001789 GO:0000160
Tpr1g2789 196 Gene3D - 4 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g2789 Tpr-Chr1 32065792 32066718 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g2789 3 185 Response Regulator Gene Family AT4G16110 35.610 7.01e-30 113
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Tpr1g2789 Response_reg 2.3e-14 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g2789 - K14491 cam:101491966 177.948