Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g2777 ATGTTTTTGAACGATAATAACAATACTAACGGCTACAACCACCATCAACCACCGTCACCACCGCCGCCGGGAATGTTGCAAACTCACAGTCACCATGACCGTGCTCGCCGTGGCACTCGCCGTTCACGTGCTTCCGCTTCCACTTCTAATTCCATTGTTAGGGTTTCCGATACCGAACAACAACCACCACCACCACCACAAGACCAACAACAACAACAACAACCTAATCGATCTCCTTGCACCGATTACGATATGGCGTATTTTCATTCCTATGCTCACCTCGGTATTCACCAAGAAATGATCAAGGATCGTGTGCGGACTGATACTTATAGGGAAGCAATCATGCGGCATCAGGATTCTATTGCTGGAAAAGTCGTAGTTGATGTTGGATGCGGTACAGGAATCCTTTCCATATTTTGTGCTCAGGCCGGTGCAAAGCGGGTGTATGCAGTTGATGCCAGTGACATTGCTCTGCAGGCAAATGAAGTTGTTAAAGCAAATAACCTTTCTGATGTTATCATTGTATTGCATGGACGAGTTGAGGATGTTGAAATTGATGAAGAGGTGGACGTTATAATTTCAGAATGGATGGGCTATATGCTACTATATGAGAGCATGCTTGGGAGTGTTATTACTGCCAGAGATCGCTGGCTCAAACCTGGTGGTCTTATTTTTCCTTCAAGTGCAACGTTGTACATGGCTCCTGTTACACATACTGACAGATACAGTGACAGCGTTGACTTTTGGCGCAATGTGTATGGAATTGATATGTCTGCCATGTTATCATTAGCAAAACAATGTGCATTTGAGGAACCTTCTGTTGAGACGATAACTGGTGAAAATGTTCTGACATGGCCACATGTGGTAAAATATCTTGATAGTTATAATGTTACCATCAGCGAGTTAGAAAGTGTAACATCGAAGTTTAAGTTCAACTCAATGATGCGAGCTCCACTGCATGGTTTTGCATTTTGGTTTGATGTTGAGTTTAATGTGCCTACGGTAGCACCAACATCAGTTATTGAAAGTCATCAGGTGAATGGTAGTTTGAGAAAAAGGCGAACAAACCCAAGTGAAACACTGGTACTATCCACTGCACCGGAGGACCCTCCAACACATTGGCAGCAGACATTGGTATACTTTTATGATCCTATTGAGCTGGAACAAGATCAAGTAATTGAAGGTTTGGTGACGTTGACCCAAAGCAAAGAAAATGCCCGGTTTATGAATATTCACCTGGAATACACTTCAGGTAATCGATCGTATGTGAAAGAGTCTGTTATGAGATGA 1290 0.4318 MFLNDNNNTNGYNHHQPPSPPPPGMLQTHSHHDRARRGTRRSRASASTSNSIVRVSDTEQQPPPPPQDQQQQQQPNRSPCTDYDMAYFHSYAHLGIHQEMIKDRVRTDTYREAIMRHQDSIAGKVVVDVGCGTGILSIFCAQAGAKRVYAVDASDIALQANEVVKANNLSDVIIVLHGRVEDVEIDEEVDVIISEWMGYMLLYESMLGSVITARDRWLKPGGLIFPSSATLYMAPVTHTDRYSDSVDFWRNVYGIDMSAMLSLAKQCAFEEPSVETITGENVLTWPHVVKYLDSYNVTISELESVTSKFKFNSMMRAPLHGFAFWFDVEFNVPTVAPTSVIESHQVNGSLRKRRTNPSETLVLSTAPEDPPTHWQQTLVYFYDPIELEQDQVIEGLVTLTQSKENARFMNIHLEYTSGNRSYVKESVMR* 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g2777 429 MobiDBLite consensus disorder prediction 1 79 - -
Tpr1g2777 429 Gene3D - 228 428 - -
Tpr1g2777 429 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 90 419 IPR029063 -
Tpr1g2777 429 MobiDBLite consensus disorder prediction 42 58 - -
Tpr1g2777 429 CDD AdoMet_MTases 126 225 - -
Tpr1g2777 429 PANTHER BNAC03G41340D PROTEIN 30 426 - -
Tpr1g2777 429 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 84 412 IPR025799 GO:0016274|GO:0018216
Tpr1g2777 429 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 30 426 IPR025799 GO:0016274|GO:0018216
Tpr1g2777 429 Pfam Ribosomal protein L11 methyltransferase (PrmA) 122 196 - -
Tpr1g2777 429 Gene3D Vaccinia Virus protein VP39 81 226 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g2777 Tpr-Chr1 31937584 31947275 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g2777 87 395 C2H2 Transcription Factor Family AT3G12270 39.198 4.22e-64 214
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g2777 K11437 - gmx:100809174 649.818