Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g2775 ATGCTTCAGAACATGAAGCATTTACCAAAGCCGTGTCTTATTGTGTTCTTTTGTTTGTTTGTAATGGCCACATCTCCTCATGCTACAACAAGAATCCAAGGCAGCAGTGAGGTTGATGCTCTGTTGAAGTGGAAAGCAAGCCTTGACAACAATAGCAAAACTTTGCTATCTTCATGGAATATTATTGGTAATAAGCATTGCAATTGGGTTGGAATCACATGTGATGACGAGTCAAAATCCATCTACAAGGTTAATCTCACTAATATTGGACTAAAAGGTACGCTTCAAAGTCTCAATTTTTCATCACTTCCAAATATTCACAGTTTAGTTTTATCAAACAACTCTTTCTATGGAGTTGTTCCACACTATATTGGTGCAATGTCCAATCTAAACACTCTTGATTTGAAACTAAATAATCTCTCTGGTAGTATTCCCAATAGTATTGGCAATTTGTCCAAACTATTTCATCTTGATCTCAGTTTCAATCATTTCACTGGAATTATTCCATCTGAGGTAACCCAATTGATTGGTCTTAATGTATTTTCCATGGCTTCTAACTCTGATTTAAGTGGATCCCTCCCACAAGAAATAGGTAGATTGAGGAATCTCACTACACTAGCTATAGCTTTGTGCAATCTCACAGGGACTATACCTACCTCAATAGAAAAGATAACCAATTTGTCAATTCTTGATTTGGGAGCTAACAAGTTTTATGGCAACATTCCTAAGAGAGTATGGAAAATGGACCTAAAGTATTTATCACTTCCATATAATAACTTCATTGGTTCCATTTCACAAGATATTTTCAAGTTAAGAAACCTAGAGATTTTATACCTCCAAGAAAGTGGTCTTTCTGGTTCCATGCCAAAGGAACTTCAAATGATGAACAATCTAATACAACTTGATATTAGTAGCTGTAATCTCACTGGGTCTATACCAATATCAATAGGAATGTTGGTCAATTTAACTCTTCTCAAGTTATTTAACAACCAACTTTTTGGCCAAATTCCTCATGAAATTGGCAACTTGGTCAACCTCGAAAGACTATATCTTAATAATAATAGTCTTTCTGGATCCATTCCTCGAGAAATTGGATTTCTAAAACAAACCAGCGAACTTGATTTCTCTGCAAACAATCTCTCTGGCACAATCCCTTCAACAATTGGAAACATGACCAATTTACATTTTCTTTACCTGTATGACAACTATCTCAGTGGTAGTATTCCTAGTGAAATCGGAAAGCTTTATTTCATTTCCACAATTCAGTTGTTATACAACAACCTCCTTGGTCTAATTCCATCTTCAATAGGTAACTTAGTCAATTTGAATACTATTGACTTTTCACAAAATAAACTCTTTGGATCAATTCCGTCCACTTTCGGAAATTTGACAAACCTTGCTATATTAGATCTTTTGTCAAATGATCTCAATGGAAATATTCCAAAAGAAATGAATAAGATTACCAATTTGGAAAATTTGCAGTTAGCTGATAACAATTTCATAGGTCATTTACCTCACAACATTTGTGTTGGTGGAATGTTAACTTGGTTCTCCGCTAGTGATAATCATTTCACAGGCTTAGTTCCAAAAAGTTTGAAAAATTGCTCCAGTCTTGTGAGAGTTAGGCTTCAAGGCAATAAAATAACTGACAATATAACAAATAGTTTTGGTGTGTATCCAAATTTGGACTACATGGAATTGAGTGATAATAATTTGTATGGTCATCTATCACCAAATTGGGGAAACTGCAAGAATCTCACATCCCTTAAAATCTCCAACAATAATTTATCAGGAATCATCCCACAAGAACTAGGTGGAGCAACTTTGTTAAGTGTACTTAACTTGTCTTCAAACCATCTTACAGGAAAAATTCCAAATGATCTAGGCAACTTGACTTCATTGATCCAACTCTCATTAAGTAACAATCACCTTTCAGGACAAGTTCCCGTTCACATTGCATCACTTCAGCATCTATCAGCATTAGAACTTGCATCAAATAATTTAAGTGGCTTCATCCCAGAACAACTTGGAAGCTTGTTTGGGTTGTTGCACTTGAACATGAGCCAAAATAAGTTTCATGGAAGCATTCCTTTTGATTTTGGCCATTTAAAAGTTATTGAAGATCTTGATCTAAGTGGGAATTTTTTGAATGGAACCATACCAGCAATGCTTGGACAATTAAATCACTTACAAACATTGAATCTGTCACACAATAATCTATCTGGTACCATTCCCTTGAGCTATGGTGAGATGTTAAGCTTGACAACTGTTGATATATCATACAACCGGTTGGAGGGTCCGATTCCAAACATTCCAGCCTTTCAAAAAGCACATATTGAAGAACTGAGAAACAACAAAGACTTGTGTGGTAATAATGCCTCTACCCTAAAGAATTGTCCAAAATCTAGTGGTAACTCTCATACTCCAAAGGCTAACAAAATTTTGGTACAAGTTTTACCCCTCACTCTAGGCACTGTACTGATAGCACTATTTGTTTGTGGGTTCTCGTATCATCGATGGCGAACTTCAAGCACAAAAGAAAACAAGGTTGCTGAAGAATCACATCCTGAAAATCTATTTGAGATATGGAGTTTTGATGGAAAAATGGTGTATGAGAACATTATTGAAGCCACAGAAGCGTTTGACAACAAGCATCTTGTTGGGGTTGGAGGACATGGAAGTGTTTACAAAGCAGAGTTGCCTACAGGACAAGTTGTAGCTGTGAAGAAACTCCATTCATTACAAAACGGAGAAATGTCGAATCTGAAAACTTTTGCAAGTGAGATTCAAGCTTTAACAGAAATCCGACATCGAAACATTGTGAAGTTATATGGATATTGTTCACACTCACGACACTCATTTTTGGTTTATGAGTTCTTGGAGAAGTGTAGTGTGGACAAAATTTTGAAAGATGATGAACTAGCAACTGCATTTGATTGGAAAATGAGGCTGAATGCCATTAAAGATGTTGCAAATGCTTTATGCTATATGCATAATGATTGTTCACCTCCTATCGTTCATCGTGATATATCCAGCAAGAATGTTATTTTGGATTTGGAATATGTGGCTCATGTATCAGACTTCGGTTCAGCTAAGTTTCTTAATCCCGATTCTTCCAACTGGACCTCTTTTGCGGGCACATTTGGATATGCTGCACCAGAACTTGCATACACAATGGTAGTAAATGAGAAGTGTGATGTGTATAGTTTTGGAGTATTAACCATGGAAATACTTTTTGGAAAGCATCCCGGAGATATTGTATCTACTATGTTGCAATCAAGTGGTTTATACCAAACAATTGATGCTATGTCATTGAATGATAAGTTGGATCAACGCCTTCCTCGTCCTACAAATGCTATCTGGAAAGAAGTGGTATCAATCATCAGAATTGGATGTCATTGCTTAATTGAAAGCCCGCATAGACGCCCATCAATGGAGCAAGTTTGCAATGAGACTGTAATGTCAAAGGCATCTTCAAATATAGCAATGGGGGTGATTTGA 3501 0.3628 MLQNMKHLPKPCLIVFFCLFVMATSPHATTRIQGSSEVDALLKWKASLDNNSKTLLSSWNIIGNKHCNWVGITCDDESKSIYKVNLTNIGLKGTLQSLNFSSLPNIHSLVLSNNSFYGVVPHYIGAMSNLNTLDLKLNNLSGSIPNSIGNLSKLFHLDLSFNHFTGIIPSEVTQLIGLNVFSMASNSDLSGSLPQEIGRLRNLTTLAIALCNLTGTIPTSIEKITNLSILDLGANKFYGNIPKRVWKMDLKYLSLPYNNFIGSISQDIFKLRNLEILYLQESGLSGSMPKELQMMNNLIQLDISSCNLTGSIPISIGMLVNLTLLKLFNNQLFGQIPHEIGNLVNLERLYLNNNSLSGSIPREIGFLKQTSELDFSANNLSGTIPSTIGNMTNLHFLYLYDNYLSGSIPSEIGKLYFISTIQLLYNNLLGLIPSSIGNLVNLNTIDFSQNKLFGSIPSTFGNLTNLAILDLLSNDLNGNIPKEMNKITNLENLQLADNNFIGHLPHNICVGGMLTWFSASDNHFTGLVPKSLKNCSSLVRVRLQGNKITDNITNSFGVYPNLDYMELSDNNLYGHLSPNWGNCKNLTSLKISNNNLSGIIPQELGGATLLSVLNLSSNHLTGKIPNDLGNLTSLIQLSLSNNHLSGQVPVHIASLQHLSALELASNNLSGFIPEQLGSLFGLLHLNMSQNKFHGSIPFDFGHLKVIEDLDLSGNFLNGTIPAMLGQLNHLQTLNLSHNNLSGTIPLSYGEMLSLTTVDISYNRLEGPIPNIPAFQKAHIEELRNNKDLCGNNASTLKNCPKSSGNSHTPKANKILVQVLPLTLGTVLIALFVCGFSYHRWRTSSTKENKVAEESHPENLFEIWSFDGKMVYENIIEATEAFDNKHLVGVGGHGSVYKAELPTGQVVAVKKLHSLQNGEMSNLKTFASEIQALTEIRHRNIVKLYGYCSHSRHSFLVYEFLEKCSVDKILKDDELATAFDWKMRLNAIKDVANALCYMHNDCSPPIVHRDISSKNVILDLEYVAHVSDFGSAKFLNPDSSNWTSFAGTFGYAAPELAYTMVVNEKCDVYSFGVLTMEILFGKHPGDIVSTMLQSSGLYQTIDAMSLNDKLDQRLPRPTNAIWKEVVSIIRIGCHCLIESPHRRPSMEQVCNETVMSKASSNIAMGVI* 1167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g2775 1166 Pfam Protein kinase domain 882 1153 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g2775 1166 Pfam Leucine rich repeat 104 164 IPR001611 GO:0005515
Tpr1g2775 1166 Pfam Leucine rich repeat 250 308 IPR001611 GO:0005515
Tpr1g2775 1166 Pfam Leucine rich repeat 585 644 IPR001611 GO:0005515
Tpr1g2775 1166 SUPERFAMILY L domain-like 534 792 - -
Tpr1g2775 1166 Gene3D Phosphorylase Kinase; domain 1 840 959 - -
Tpr1g2775 1166 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 13 180 - -
Tpr1g2775 1166 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 305 402 - -
Tpr1g2775 1166 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 133 221 - -
Tpr1g2775 1166 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 205 354 - -
Tpr1g2775 1166 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 157 310 - -
Tpr1g2775 1166 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 349 1158 - -
Tpr1g2775 1166 Gene3D Ribonuclease Inhibitor 186 250 IPR032675 -
Tpr1g2775 1166 ProSitePatterns Protein kinases ATP-binding region signature. 887 910 IPR017441 GO:0005524
Tpr1g2775 1166 SMART LRR_typ_2 103 127 IPR003591 -
Tpr1g2775 1166 SMART LRR_typ_2 631 654 IPR003591 -
Tpr1g2775 1166 SMART LRR_typ_2 319 342 IPR003591 -
Tpr1g2775 1166 SMART LRR_typ_2 151 175 IPR003591 -
Tpr1g2775 1166 SMART LRR_typ_2 727 751 IPR003591 -
Tpr1g2775 1166 SMART LRR_typ_2 655 679 IPR003591 -
Tpr1g2775 1166 SMART LRR_typ_2 343 367 IPR003591 -
Tpr1g2775 1166 SMART LRR_typ_2 439 462 IPR003591 -
Tpr1g2775 1166 SMART LRR_typ_2 487 511 IPR003591 -
Tpr1g2775 1166 SMART LRR_typ_2 391 415 IPR003591 -
Tpr1g2775 1166 SUPERFAMILY Protein kinase-like (PK-like) 863 1151 IPR011009 -
Tpr1g2775 1166 ProSiteProfiles Leucine-rich repeat profile. 729 750 IPR001611 GO:0005515
Tpr1g2775 1166 Gene3D Ribonuclease Inhibitor 487 802 IPR032675 -
Tpr1g2775 1166 Gene3D Ribonuclease Inhibitor 251 371 IPR032675 -
Tpr1g2775 1166 Gene3D Ribonuclease Inhibitor 372 486 IPR032675 -
Tpr1g2775 1166 Gene3D Ribonuclease Inhibitor 34 185 IPR032675 -
Tpr1g2775 1166 ProSiteProfiles Protein kinase domain profile. 881 1154 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g2775 1166 ProSitePatterns Tyrosine protein kinases specific active-site signature. 1005 1017 IPR008266 GO:0004672|GO:0006468
Tpr1g2775 1166 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 133 221 - -
Tpr1g2775 1166 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 13 180 - -
Tpr1g2775 1166 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 157 310 - -
Tpr1g2775 1166 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 349 1158 - -
Tpr1g2775 1166 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 305 402 - -
Tpr1g2775 1166 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 205 354 - -
Tpr1g2775 1166 Pfam Leucine Rich Repeat 345 367 IPR001611 GO:0005515
Tpr1g2775 1166 SUPERFAMILY RNI-like 84 332 - -
Tpr1g2775 1166 Pfam Leucine rich repeat N-terminal domain 36 75 IPR013210 -
Tpr1g2775 1166 Gene3D Transferase(Phosphotransferase) domain 1 961 1163 - -
Tpr1g2775 1166 SUPERFAMILY RNI-like 253 609 - -
Tpr1g2775 1166 SMART serkin_6 881 1154 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g2775 Tpr-Chr1 31915554 31919460 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g2775 613 770 Receptor kinase-like Gene Family AT4G08850 33.962 2.25e-15 79.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Tpr1g2775 Pkinase 8.3e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g2775 - - mtr:MTR_1g040615 1365.9