Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g2773 ATGCTTTTATTCCCAATGTTTCATACTATGAAGCTCTTACCTATGCATTGTGTTTTGTTGTTTTTTTATGTGTTTGTAATGACCACATCACATCAAGCTTCAACAAAAATCCAAAGCAGCGAAGCAAATGCTCTATTGAAATGGAAAGCAAGCTTTGACAATCAAAGCAAGGCTTTGCTCTCTTCATGGAATATTGGTAATAAGCCTTGCAATTGGATGGGAATCACATGTGATGTTGAGTCAAAATCCATCTACAAGGTAAATCTTACCAATGTTGGAGTAAAAGGTACACTTCAAAGTCTCAATTTCTCATCACTTTCAAAAATTCGCAGTTTAGTTTTATCGAACAACTCTTTTTACGGAGTTGTTCCACACCAAATTGGTGTAATGTCTGATCTAAACACTCTTGATTTTTCACTAAATAATCTCTCTGGCAGTATTCCTAATTGCGTTTGTAATTTGTCCAAACTATCTTATCTTGATCTCAGTTTCAATTATTTCACTGGAATTATTCCATATGAGATAACCCAATTAGTTGGTCTTTATGTATTGTCTATGAGTACTAACAATGGTTTAAGTGGCTCCCTCCCACAAGAAATTGGTAGATTAAGGAATTTGACAAAGCTTGATATTTTTTCATGCAATCTCACCGGGAGTATACCAATATCTATAGAAAAGATAACCAACATGTCATATCTTGATGTAACACAAAACAACCTTTATGGAACCATTCCTCGTGGAATATGGAAAATGGACTTAAAGCATTTGTCACTTGCAAATAATAACTTCAATGGTTCCATCCCACAAAGTATTTTCGAGTCACCAAACTTGGAGTTTCTACATCTTCAAGAAAGTGGCCTTTCTGGATTCATGCCTAAGGAATTTGGGATGTTGGGTAATTTGATAGATCTTGATATTAGTAACTGCAATCTTATTGGGTCTATCTCCAGTTCTATAGGAAAGTTGGCCAATATATCATATCTCAAGTTACATGACAATCGACTTTTTGGCCACATTCCTCGTGAAATTGGAAATTTGGTCAACCTCAAGCAACTATATCTTGGTGCTAATAGTCTTTCAGGCTCCTTTCCTCGTGAAATTGGATTTCTGAAACAACTTGTTGAACTTGATTTGTCTGTTAACTATATTGTAGGCACAATCCCTTCTTCAATAGGAAACTTGAGCAATATACAATTACTTTACCTTTATAGTAATAATCTTAGTGGTAGCATTCCTAATGAAGTCGTAAAACTTGGTTCTCTAAAAACAATCCAATTGTCTTTTAACAACCTAGCTGGACCAATCCCATCATCCATAGGTAACTTAGTCAATCTGGAATCTATTTTTCTTGATCAAAATAAACTTTCAGGACTTATTCCACCTTCCATAGGTTCCCTGATTAATTTGGATAGTATTTACCTTTCACACAATCAACTCTATGGACCAATTCCTTCCGCTATCGTAAATTTAACAAAATTACGTGAATTATCTCTTTCCACAAATGCTCTCACTGGACAAATTCTACCTTCCATAGGTAACTTGGTCAATTTGGATACTCTCGACCTTTCAAAAAATAACTTCTATGGACAAATTCCTTCCACTATCAGAAATTTAACAAAAGTAAGTGTATTATCCTTTATCTCAAATGCACTCACAGGAAATATCCCAACAGAAATAAATATGCTTACCAATTTGGAAATTTTCCAGTTAGCTTATAATAACTTTACAGGCCATTTACCTCACAATATATGTGTTAGTGGAAAGTTGACACGTTTCTCTGCTAATGGTAACCAATTCACAGGCCCAGTTCCAGAAAGTTTGAAGAATTGCTCAAGCCTTGAGAGAGTCAGGCTTGAACAAAATAGGTTAACTGGAAATATAGCAGATATCTTTGATGTGTATCCAAACTTGGACTATCTGGGATTGAGTTATAATAATTTTTATGGCCACCTTTCTTCAAATTGGGGAAAATGCAAGAATCTCACAACCCTTAAAATCTCGAACAATAATTTAACAGGAAGTATACCACCAGAGTTGGCTGGGGCAACCAATTTACATATACTTGACTTGTCCTCGAATCAACTTAATGGAGAAATTCCCAAGGAGCTAGGAAACTTATCTTCGTTGATCCAACTCTCAATAAGTAACAATCATCTTTCAGGAGAAATTCCTGTACAGATTGCCTCATTGCAGAAAATAGAAACCTTGGAGTTTGCAACAAATAATTTAAGTGGCTTGATCCCAAAACAACTTGGAAGGTTACCTTTCTTATTGCACTTGAACTTGAGCCAAAATAAGTTTGAAGGAAACATTCCTATTGAGATTGGTCAGTTAAAAGTTGTTGAGAATCTTGACCTTAGTGGGAATTTTTTGAATGGAACCATACCAATAATGCTTGGACAATTAAATCGTTTAGAAACATTGAATCTCTCACATAATAATCTTTCTGGTACCATTCCCTTGAGCTATGGTGAGATGTTAAGTTTATTGATTGTTGATATATCATACAACCAGTTGGAGGGTCTGATTCCAAACATTACGGCCTTCGAAAAAGCTCCAATTGAAGCTCTTAAGAACAACAAGGGATTGTGTGGTAATGTCGCTGGCCTTAAGCCTTGCTCAACTTCAGGTAGCAACTTTCATAGTCATAAGACTAACAAAATTTTGGTGCTAGTTTTACCCCTCACTCTAGGCACTCTATTGTTAGCATTATTTGTTTATGGGCTCTCATACATTTTATTCCAAACTTTAAGAACAAAAGAATATAAGCATGCAGAAGAAATTCAAACTGAAAATCTATTTGCAATATGGAGCTTTGATGGTCAAATGGTGTATGAAAACATTATCGAAGCCACGGAACAATTTGACAACAAACATCTCATTGGGGTAGGAGGGCAAGGAAGTGTTTACAAAGCAGAGTTACCTACAGGTCAAGTGGTAGCTGTGAAGAAACTCCATTCATTACAAAATGGAGAAGTGTCTAATCTAAAAGCTTTTGCAAATGAGATTAGTGCTTTGACAGAAATCCGACATCGAAACATTGTGAAGTTATACGGGTTTTGTTCACATTCACTACACTCGTTTTTGGTTTACGAGTTCTTAGAGAAGGGTAGTATGGACAAAATTTTGAAAGATGATGAACTAGCAACTGCATTTGATTGGAATATGAGAGTGAATGCCATTAAAGATATAGCTAATGCTTTATCTTATATGCATCATGATTGTTATCCTGCAATCGTTCATCGTGATATATCCAGCAAGAATGTTGTTTTGGATTCAGAGTATGTAGCTCATGTTTCAGACTTTGGAACCGCTAAGTTTCTTAATCCCGATTCTTCCAACCGAACCGGTTTTGTAGGCACCTTTGGATATTCGGCTCCAGAACTTGCGTACACAATGGAGGTAAATGAGAAATGCGATGTGTATAGTTTTGGGGTATTAACTTTGGAAATACTTTTGGGGATGCACCCCGGAGATGTTGTAACTTCTTTATGGCAACAACCTTCACAGAGTGCTATGGACATCACACTTGATAATATGCCATTGATCGATAAGATTGACCAACGTCTCCCTCATCCTACAAATACTATTGTTAAGGAGGTGGCATCAATGATAAGGGTAGCAATGTATTGCTTGATTGAAAGCCCGCGTTCTCGCCCTACCATGGAGCAGGTTTGCAAGGAGCTTGTGGTGTCAAAGTCATCTTGA 3708 0.3635 MLLFPMFHTMKLLPMHCVLLFFYVFVMTTSHQASTKIQSSEANALLKWKASFDNQSKALLSSWNIGNKPCNWMGITCDVESKSIYKVNLTNVGVKGTLQSLNFSSLSKIRSLVLSNNSFYGVVPHQIGVMSDLNTLDFSLNNLSGSIPNCVCNLSKLSYLDLSFNYFTGIIPYEITQLVGLYVLSMSTNNGLSGSLPQEIGRLRNLTKLDIFSCNLTGSIPISIEKITNMSYLDVTQNNLYGTIPRGIWKMDLKHLSLANNNFNGSIPQSIFESPNLEFLHLQESGLSGFMPKEFGMLGNLIDLDISNCNLIGSISSSIGKLANISYLKLHDNRLFGHIPREIGNLVNLKQLYLGANSLSGSFPREIGFLKQLVELDLSVNYIVGTIPSSIGNLSNIQLLYLYSNNLSGSIPNEVVKLGSLKTIQLSFNNLAGPIPSSIGNLVNLESIFLDQNKLSGLIPPSIGSLINLDSIYLSHNQLYGPIPSAIVNLTKLRELSLSTNALTGQILPSIGNLVNLDTLDLSKNNFYGQIPSTIRNLTKVSVLSFISNALTGNIPTEINMLTNLEIFQLAYNNFTGHLPHNICVSGKLTRFSANGNQFTGPVPESLKNCSSLERVRLEQNRLTGNIADIFDVYPNLDYLGLSYNNFYGHLSSNWGKCKNLTTLKISNNNLTGSIPPELAGATNLHILDLSSNQLNGEIPKELGNLSSLIQLSISNNHLSGEIPVQIASLQKIETLEFATNNLSGLIPKQLGRLPFLLHLNLSQNKFEGNIPIEIGQLKVVENLDLSGNFLNGTIPIMLGQLNRLETLNLSHNNLSGTIPLSYGEMLSLLIVDISYNQLEGLIPNITAFEKAPIEALKNNKGLCGNVAGLKPCSTSGSNFHSHKTNKILVLVLPLTLGTLLLALFVYGLSYILFQTLRTKEYKHAEEIQTENLFAIWSFDGQMVYENIIEATEQFDNKHLIGVGGQGSVYKAELPTGQVVAVKKLHSLQNGEVSNLKAFANEISALTEIRHRNIVKLYGFCSHSLHSFLVYEFLEKGSMDKILKDDELATAFDWNMRVNAIKDIANALSYMHHDCYPAIVHRDISSKNVVLDSEYVAHVSDFGTAKFLNPDSSNRTGFVGTFGYSAPELAYTMEVNEKCDVYSFGVLTLEILLGMHPGDVVTSLWQQPSQSAMDITLDNMPLIDKIDQRLPHPTNTIVKEVASMIRVAMYCLIESPRSRPTMEQVCKELVVSKSS* 1236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g2773 1235 SUPERFAMILY Protein kinase-like (PK-like) 938 1229 IPR011009 -
Tpr1g2773 1235 Gene3D Ribonuclease Inhibitor 190 249 IPR032675 -
Tpr1g2773 1235 Gene3D Ribonuclease Inhibitor 516 583 IPR032675 -
Tpr1g2773 1235 Gene3D Transferase(Phosphotransferase) domain 1 1034 1235 - -
Tpr1g2773 1235 PRINTS Leucine-rich repeat signature 685 698 - -
Tpr1g2773 1235 PRINTS Leucine-rich repeat signature 802 815 - -
Tpr1g2773 1235 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 168 315 - -
Tpr1g2773 1235 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 17 183 - -
Tpr1g2773 1235 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 422 1235 - -
Tpr1g2773 1235 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 278 430 - -
Tpr1g2773 1235 Pfam Protein kinase domain 956 1228 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g2773 1235 SUPERFAMILY L domain-like 40 313 - -
Tpr1g2773 1235 Gene3D Ribonuclease Inhibitor 250 510 IPR032675 -
Tpr1g2773 1235 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 168 315 - -
Tpr1g2773 1235 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 278 430 - -
Tpr1g2773 1235 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 17 183 - -
Tpr1g2773 1235 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 422 1235 - -
Tpr1g2773 1235 Gene3D Phosphorylase Kinase; domain 1 915 1033 - -
Tpr1g2773 1235 ProSiteProfiles Protein kinase domain profile. 955 1231 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g2773 1235 SUPERFAMILY L domain-like 253 503 - -
Tpr1g2773 1235 Pfam Leucine Rich repeats (2 copies) 659 699 IPR025875 -
Tpr1g2773 1235 SMART LRR_sd22_2 370 396 - -
Tpr1g2773 1235 SMART LRR_sd22_2 682 708 - -
Tpr1g2773 1235 SMART LRR_sd22_2 466 492 - -
Tpr1g2773 1235 SMART LRR_sd22_2 514 540 - -
Tpr1g2773 1235 SMART LRR_sd22_2 346 361 - -
Tpr1g2773 1235 SMART LRR_sd22_2 130 156 - -
Tpr1g2773 1235 SMART LRR_sd22_2 442 460 - -
Tpr1g2773 1235 Gene3D Ribonuclease Inhibitor 38 189 IPR032675 -
Tpr1g2773 1235 ProSitePatterns Tyrosine protein kinases specific active-site signature. 1079 1091 IPR008266 GO:0004672|GO:0006468
Tpr1g2773 1235 Pfam Leucine rich repeat 444 503 IPR001611 GO:0005515
Tpr1g2773 1235 Pfam Leucine rich repeat 108 166 IPR001611 GO:0005515
Tpr1g2773 1235 Pfam Leucine rich repeat 372 431 IPR001611 GO:0005515
Tpr1g2773 1235 Gene3D Ribonuclease Inhibitor 584 876 IPR032675 -
Tpr1g2773 1235 SUPERFAMILY RNI-like 520 841 - -
Tpr1g2773 1235 Pfam Leucine Rich Repeat 300 322 IPR001611 GO:0005515
Tpr1g2773 1235 Pfam Leucine rich repeat N-terminal domain 40 78 IPR013210 -
Tpr1g2773 1235 SMART LRR_typ_2 562 586 IPR003591 -
Tpr1g2773 1235 SMART LRR_typ_2 683 706 IPR003591 -
Tpr1g2773 1235 SMART LRR_typ_2 754 778 IPR003591 -
Tpr1g2773 1235 SMART LRR_typ_2 490 513 IPR003591 -
Tpr1g2773 1235 SMART LRR_typ_2 253 274 IPR003591 -
Tpr1g2773 1235 SMART LRR_typ_2 154 177 IPR003591 -
Tpr1g2773 1235 SMART LRR_typ_2 826 849 IPR003591 -
Tpr1g2773 1235 SMART LRR_typ_2 322 346 IPR003591 -
Tpr1g2773 1235 SMART LRR_typ_2 802 824 IPR003591 -
Tpr1g2773 1235 SMART LRR_typ_2 514 538 IPR003591 -
Tpr1g2773 1235 SMART LRR_typ_2 370 394 IPR003591 -
Tpr1g2773 1235 SMART LRR_typ_2 442 466 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g2773 Tpr-Chr1 31904665 31908742 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g2773 252 772 Receptor kinase-like Gene Family AT4G08850 37.064 1.10e-88 308
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Tpr1g2773 Pkinase 1.2e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g2773 - - mtr:MTR_1g040615 1418.68