Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g2752 ATGTTACAACCAAACATGGGAGATACATGGGGTGGGCTCTTGGTAAAACAGAAGCTATGGAGGAATGATGTACCGTCAAAGGTACATGTATTTGGCTGGAGGTTATTATTAGAAAGGTTGCCAATGAGATCTGCACTTCATCACAGAGCCTGGATTTTGAAACATCATGGAGGAACTTTTCAGTTTAAAGGACCTTGGTTCACAAACATTGCCAACTTTATCCTCACTAGTGATCCCATGAATGTGCACCACATCACTAGCAAGAATTTCACAAACTATGGAAAAGGGTCTGATTTCCATGAGATTTTTGAACTTCTTGGTCTTGGTATTTTCAATTTGGATTCCGATGAATGGAAGCACGAAAGGACACTACTTCATTCATTGCTCAAAAATAAAAACTTTGAGATATTCCTCCAACAAATCATTCAAAATAAGCTAGAGAATTGCTTATTACCATTTCTTGATCAAGCATCTAAAGGAGTACAAGTACTTGACTTGCAAGATATTCTTGAAAGGTTCACCTTTGATACTGCTTGCACTTCTTTATTTGGATTTGATCCTAATTGCCTTCCTTACAACTTTAACGAGTTATCAGAAATTGCTTATGTAAAAGCTATTTCTGTGCTTGAGGATATGATATTGTTCAGGCACTATATTCCAAAATGCATTTGGAAGCTACAAAAATGGTTAAACATTGGTCAAGAGAAGAAGGGCAAGGTAGCTCAAGAAACTCTTCACCAATTTTTATACAAATGTATAAATTATTACAAAGGCAATGAAGATGTGGATGAAAGCCATTCTTGCTTGTTAAAGGAACTAATGAAGGAAGGACTGGAAAAGGGGGAAAAGTTTGACAGGTATATTCGAGACACCGCAGTCAATCTTTTAATTGCAGGAAATGGAACAATTAGTTCTGGTCTCAGTTGGTTTTTTTGGCTTGTTTCAATTCATCCTATTGTAGAAGCTAAAATTATTCAAGAGATTAGAGATAATTGTTTAACACAAGGGGAGAACTTAATCACTAATTTCAGTGTAGAAGTTCTTGATAAGCTAGTTTACCTTCATGGAGCTATAAGTGAAGCCTTAAGGCTTTTTCCTCCACTAGCATTTCAACACAAATGTGCAATCAAATCTGATAAACTACCTAGTGGAGACCATGTTAAGCCAAATACAAAGTTAATATACTCTTTGTATGCAATGGGAAGGACGGAACAAATATGGGGAGAAGATTGTCTGGAATTTAAACCGGAGAGATGGATATCAGACAGAGGACAAATTAAACACGTACCATCTTACAAGTTCATTGCATTCAATGCTGGTCCAAGAAGTTGTCTTGGGAAAGATATTAGCTTTGTTGAAATAAAAATGGTTGCAATTTCTATTTTATGGAAGTTCCGCATACATGTTGTGGAAGGTCACTCTATAGCTCCAAAAGTTTCTATTGCTCTTCGCATGAAAGATGGCTTGAAGATCAAAGTAAATAAAAGATATGATTGA 1497 0.3614 MLQPNMGDTWGGLLVKQKLWRNDVPSKVHVFGWRLLLERLPMRSALHHRAWILKHHGGTFQFKGPWFTNIANFILTSDPMNVHHITSKNFTNYGKGSDFHEIFELLGLGIFNLDSDEWKHERTLLHSLLKNKNFEIFLQQIIQNKLENCLLPFLDQASKGVQVLDLQDILERFTFDTACTSLFGFDPNCLPYNFNELSEIAYVKAISVLEDMILFRHYIPKCIWKLQKWLNIGQEKKGKVAQETLHQFLYKCINYYKGNEDVDESHSCLLKELMKEGLEKGEKFDRYIRDTAVNLLIAGNGTISSGLSWFFWLVSIHPIVEAKIIQEIRDNCLTQGENLITNFSVEVLDKLVYLHGAISEALRLFPPLAFQHKCAIKSDKLPSGDHVKPNTKLIYSLYAMGRTEQIWGEDCLEFKPERWISDRGQIKHVPSYKFIAFNAGPRSCLGKDISFVEIKMVAISILWKFRIHVVEGHSIAPKVSIALRMKDGLKIKVNKRYD* 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g2752 498 SUPERFAMILY Cytochrome P450 30 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g2752 498 PRINTS E-class P450 group I signature 287 304 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g2752 498 PRINTS E-class P450 group I signature 307 333 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g2752 498 PRINTS E-class P450 group I signature 434 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g2752 498 PRINTS E-class P450 group I signature 444 467 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g2752 498 Gene3D Cytochrome P450 25 497 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g2752 498 PANTHER CYTOCHROME P450 42 492 - -
Tpr1g2752 498 PANTHER CYTOCHROME P450 FAMILY PROTEIN 42 492 - -
Tpr1g2752 498 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 437 446 IPR017972 GO:0005506|GO:0016705
Tpr1g2752 498 PRINTS P450 superfamily signature 298 315 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g2752 498 PRINTS P450 superfamily signature 356 367 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g2752 498 PRINTS P450 superfamily signature 435 444 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g2752 498 PRINTS P450 superfamily signature 444 455 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g2752 498 Pfam Cytochrome P450 77 480 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g2752 Tpr-Chr1 31651593 31654605 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g2752 52 496 Cytochrome P450 AT2G23180 43.668 2.02e-134 397
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g2752 - - cam:101494575 623.624