Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g2745 ATGGCCCAATCTCTGTTATTCACAGTGAAGAGGCATGCCCCTGAATTTGTAAAGCCATCAAAACCAACGCCTCATGAAATAAAACTACTCTCAGACATAGATGACCAAGATGGATTACGTTTTCAAATTCCAGTGATACAATTTTACAAATATGATCCAAATATGAAAGGGAAAGACCCTGTTGATGTTATTAGAAAAGCACTTTCAAAAACACTTGTGTTTTATTATCCATTTGCAGGTAGATTGAGGGAAGGTCCTGGTAGGAAACTTATGGTTGATTGTAATGATGAAGGTGTTTTGTTCATTGAAGCTGATGCTGATGTTAGACTTGAAGAATTTGGTGATGCTCTTCAACCTCCTTTTCCTTGTTTGAATGAACTTCTTTTTGATGTCCCTGGTTCTTCAGAAGTGCTTAATACTCCATTGCTGCTTATTCAGGTAACACGCCTTAAGTGTGATGGTTTCATTTTTGCTCTTCGTCTAAATCACACAATGAGTGATGCCTCAGGTATATTTCAATTCATGAGTGCCTTAGGTGAAATATCTCGGGGAAATAGCGAACCTTCAATCTCACCAGTGTGGTGCAGAGAACTTCTTAATGCAAGGGACCCACCAAGAATGACATGTACTCATCGCGAATATGAACAAGTACCATATGACAATGATACAATCTTTCCCTTAAACGACGTGGTCCACCGCACATTCTTCTTTGGTCCAACCGAGGTAGCTGTAATTCGTTCTCTCCTTCCAACTCACCAACTAAAACAATACTCCAATTTTGAAATCATCACCGCATACTTTTGGCGTTGTCGTATAATAGCATTACAATTAGATTATGACAAAGAAATACGCATAATCTGCATAGTCAATGCACGTAGCAAATTTGTTAACCTACCGTTACCAAAAGGTTACTATGGTAACGCTTTAGCGTATGCCACTGCAGTTACAACTCCAAGAAAACTAATTGAAAATACGTTGGATTATGCACTGAATTTAGTTAAGAAAGCAAAAGCTAATGTCACCCGAGAGTATATGCATTCAGTAGCCGATTTAATGGTTATTAAGGGTCGACCTCACTTTACTTTGGCGAGATCGCATATCGTTGTTGATGTGACACGAGCTAGATTTGGAGAGGTTAATTTCGGTTGGGGGAAAGCTGTTTATGGAGGACAAGCTAGAGGAGGAGGAGATGGTGATATTCCTGGTCTTGTTAGCTATCATATACCTTTTAAGAATGCGAAAGGAGAAGAAGGTGTGGTTATACCATCTTTTTTTCCAACTCAAATCATGGAGCGGTTGGTCAAAGAGATGGAGAGTGTGCTTAAGAGCAACACTAATCAACCCACTAAGGGTGATCATGGTATCATTATTTCTTCGTTATAG 1383 0.3926 MAQSLLFTVKRHAPEFVKPSKPTPHEIKLLSDIDDQDGLRFQIPVIQFYKYDPNMKGKDPVDVIRKALSKTLVFYYPFAGRLREGPGRKLMVDCNDEGVLFIEADADVRLEEFGDALQPPFPCLNELLFDVPGSSEVLNTPLLLIQVTRLKCDGFIFALRLNHTMSDASGIFQFMSALGEISRGNSEPSISPVWCRELLNARDPPRMTCTHREYEQVPYDNDTIFPLNDVVHRTFFFGPTEVAVIRSLLPTHQLKQYSNFEIITAYFWRCRIIALQLDYDKEIRIICIVNARSKFVNLPLPKGYYGNALAYATAVTTPRKLIENTLDYALNLVKKAKANVTREYMHSVADLMVIKGRPHFTLARSHIVVDVTRARFGEVNFGWGKAVYGGQARGGGDGDIPGLVSYHIPFKNAKGEEGVVIPSFFPTQIMERLVKEMESVLKSNTNQPTKGDHGIIISSL* 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g2745 460 Pfam Transferase family 12 439 - -
Tpr1g2745 460 Gene3D - 8 213 IPR023213 -
Tpr1g2745 460 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 7 443 - -
Tpr1g2745 460 Gene3D - 214 437 IPR023213 -
Tpr1g2745 460 PANTHER ALCOHOL ACYLTRANSFERASE 7 443 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g2745 Tpr-Chr1 31589791 31594994 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g2745 40 421 Monolignol Biosynthesis Gene Families AT5G48930 28.535 2.21e-40 148
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g2745 K19861 - gmx:100797017 628.246