Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g2744 ATGGCCCAATCTTTGTTATTCACAGTGAAGAGGCATGCCCCTGAGTTTGTAAAGCCATCAAAAACAACACCACATACAATAAAACTACTCTCAGACATAGATGACCAAGATGGATTGCGTTTTCAAATTCCTCTTATACAATTTTACAGATATGATCCAAATATGAAAGGAAAAGACCCTGTTGATGTTATTAGAAAAGCACTTGCAAAAACACTTGTGTTTTATTATCCATTTGCAGGTAGATTAAGGGAACTTTCTGGTAGGAAACTTATGGTTGATTGTAATGATGAAGGTGTTTTGTTTATTGAAGCTGATGCTGATGTTAGACTTGAACAATTTGGTGATGCTCTTCAACCTCCTTTTCCTTGTTTGAATGAACTTCTTTTTGATGTACCTGGTTCTTCAGAAGTGCTTAATACTCCATTGCTGCTTATTCAGGTAACACGTCTCAAATGTGGTGGATTTATTTTCGCTCTTCGTTTAAATCATGCAATAAGCGATGCAGCAGGTTTGACCCAATTTATGAGTGCCTTGGGTGAAATTTCTCTTGGGATGAAAGCACCTTCAATTGCACCAGTGTGGAAAAGAGAGCTACTAAACGCAAGAGACCCACCAAGAGTGACATGCTTTCATCGTGAATACGAACAAATACCAAACACCAAAGGAACCATTATCCCCTTAGACAACATGGCCCATCGCTCTTTCTTTTTTGGTCCCACCGAGTTAGCGGCAATTCGCGCTCTTCTTCCGCATCATCAACAACAACAACATTCCAATTTTGAAATTCTCACAGCATGCCTCTGGCGTTGTCGTACAATAGCTTTACATCCAGACACTGACGAAGAAGTTCGCATAATCTGCATCGGTGACATGCGTAGCAAGTTTAATCCACCATTACCAAATGGTTACTACGGTAATGTTATTGCATTTCCCGTTGCAGTTACAACCGCAGGAAAACTAATTGAAAATCCGTTGGAGTATGCATTGGAATTAGTTAAAAAAGCAAAAGCTAACATCACTCAAGAATACATGCATTCAGTTGCTGATCTTATGGTTATCAAAAATCGACCTCATTTTACTGTGGCGAGATCGTTTCTAGTGTCGGATGTGTCACGTTTGAAGGTTAGAGATGTTGATTTTGGTTGGGGGAAAGCTGTTTATGGAGGACCAGCTAAAGGAGGAGTTGGTGCTATTCCAGGTATTGCTAGTTTTTATATAGCTTTTAAAAATGCTAAAGGAGAAGAAGGTTTGGTCATACCGGTTTGTTTGCCAAATAAAGCTATGGAGAGGTTCGTTAAAGAGTTAGATAATGTGCTTAAGAACAACATTAACCAACCTACTATGGTCGATCAAAAATCCAGTTTCATTAAGGCTTCGTTGTAA 1383 0.3912 MAQSLLFTVKRHAPEFVKPSKTTPHTIKLLSDIDDQDGLRFQIPLIQFYRYDPNMKGKDPVDVIRKALAKTLVFYYPFAGRLRELSGRKLMVDCNDEGVLFIEADADVRLEQFGDALQPPFPCLNELLFDVPGSSEVLNTPLLLIQVTRLKCGGFIFALRLNHAISDAAGLTQFMSALGEISLGMKAPSIAPVWKRELLNARDPPRVTCFHREYEQIPNTKGTIIPLDNMAHRSFFFGPTELAAIRALLPHHQQQQHSNFEILTACLWRCRTIALHPDTDEEVRIICIGDMRSKFNPPLPNGYYGNVIAFPVAVTTAGKLIENPLEYALELVKKAKANITQEYMHSVADLMVIKNRPHFTVARSFLVSDVSRLKVRDVDFGWGKAVYGGPAKGGVGAIPGIASFYIAFKNAKGEEGLVIPVCLPNKAMERFVKELDNVLKNNINQPTMVDQKSSFIKASL* 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g2744 460 Gene3D - 216 435 IPR023213 -
Tpr1g2744 460 PANTHER - 8 444 - -
Tpr1g2744 460 Pfam Transferase family 12 435 - -
Tpr1g2744 460 Gene3D - 8 215 IPR023213 -
Tpr1g2744 460 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 8 444 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g2744 Tpr-Chr1 31584860 31589283 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g2744 17 435 Monolignol Biosynthesis Gene Families AT5G48930 30.415 8.56e-53 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g2744 K19861 - gmx:100797017 720.694