Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g2742 ATGGCTTCTCTGTTATTCACAGTACAGAGGCATGCCCCTGAGTTTGTAAAGCCATCAAAACCAACACCTCATGAAATAAAACTACTCTCAGACATTGATGACCAAGATGGTTTACGTTTTCAAATTCCAGTGATACAATTTTACAAATATGATCCAAATATGAAAGGGAAAGACCCTGTTGATGTTATTAGAAAAGCACTTTCTAAAACACTTGTGTTTTATTATCCATTTGCAGGTAGATTGAGGGAAGGTCCTGGTAGGAAACTTATGGTTGATTGTAATGATGAAGGTGTTTTGTTCATTGAAGCTGATGCTGATGTTAGACTTGAACAATTTGGTGATGCTCTTCAACCTCCTTTTCCTTGTTTGAATGAACTTCTTTTTGATGTTCCTGGTTCTTCAGAAGTGCTTAATACTCCATTGCTGCTTATTCAGGTAACACGTCTTAAGTGCGGTGGTTTTATTTTCGCCCTTCGTCTAAATCATACAATGAGCGACGCAGCAGGTTTGACCCAATTTATGAGTGCCTTGGGCGAAATATCTCGTGGGATGAAAGAACCTTCAATTGCACCGGTGTGGAATAGAGAGCTACTAAATGCAAGGGACCCACCAAGAGTGACATGCACTCATCGTGAATATGAACAAATTGCCGACACCAAAGGAACCATTATCCCCTTAGACGACATGGCCCACCGTTCTTTCTTTTTCGGTCCCACCGAGGTAGCCTCTATTCGCGCCCTCCTTCCACCTCATCAACAAAAACAATCCAATTTTGAAATTCTCACGGCATGTCTCTGGCGTTGTCGTACAATAGCGTTACAACCAGATAGTGACGAAGAAGTTCGCATAATCTGTATCGTTAACGCACGTGGCAAGTTTAATCCTCCCTTACCAAATGGTTACTACGGTAATACTTTTGCATTTCCTGTTGCAGTTACAACTGCAGGAAAACTGATTGAAAATCCGTTGGGGTATGCATTGGAATTAGTTAAAAAAGCAAAAGCTGACGTCACTCAAGAATATATGCATTCAATTGCGGATCTTATGGTTACCAAGGATCGACCTCATTTCACTGTGGTGAGATCGTTTCTAGTGTCTGATGTGACACGTGCTGCTTTTGGAGAGGTTGATTTTGGTTGGGGGAAAGCTTTTTATGGAGGACCAGCTAAGGGAGGAGTTGGTGCTATTCCTGGTGTTGCTAGCTTTTATATACCTTTTAAAAATGCTAAAGGAGAGGAAGGTTTGGTTATACCTGTTTGTTTGCCAAATCAAGCCATGGAGAGGTTTGTTAAAGAGTTAGATAATGTGCTTAAGAACAACATTAACCAATCTACTATAGGTGGTAAAAAATCTAGTTTCATTATTTCTTCGTTGTAA 1377 0.4045 MASLLFTVQRHAPEFVKPSKPTPHEIKLLSDIDDQDGLRFQIPVIQFYKYDPNMKGKDPVDVIRKALSKTLVFYYPFAGRLREGPGRKLMVDCNDEGVLFIEADADVRLEQFGDALQPPFPCLNELLFDVPGSSEVLNTPLLLIQVTRLKCGGFIFALRLNHTMSDAAGLTQFMSALGEISRGMKEPSIAPVWNRELLNARDPPRVTCTHREYEQIADTKGTIIPLDDMAHRSFFFGPTEVASIRALLPPHQQKQSNFEILTACLWRCRTIALQPDSDEEVRIICIVNARGKFNPPLPNGYYGNTFAFPVAVTTAGKLIENPLGYALELVKKAKADVTQEYMHSIADLMVTKDRPHFTVVRSFLVSDVTRAAFGEVDFGWGKAFYGGPAKGGVGAIPGVASFYIPFKNAKGEEGLVIPVCLPNQAMERFVKELDNVLKNNINQSTIGGKKSSFIISSL* 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g2742 458 Pfam Transferase family 11 433 - -
Tpr1g2742 458 Gene3D - 214 433 IPR023213 -
Tpr1g2742 458 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 8 442 - -
Tpr1g2742 458 PANTHER - 8 442 - -
Tpr1g2742 458 Gene3D - 7 213 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g2742 Tpr-Chr1 31551973 31556385 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g2742 39 433 Monolignol Biosynthesis Gene Families AT5G48930 28.883 1.30e-45 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g2742 K19861 - gmx:100797017 759.214