Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g2741 ATGGCTCAATCTTTGTTATTCAAAGTGAAGAGACATGACCCTGAATTTATAAAACCATCAAAACCAACTCCTCATATAATAAAACTACTCTCAGATATAGATGACCAACCTACGTTACGTTTTCAAATTCCAGTGATACAATTTTACAAATATGATCCAAATATGAATGGGAAAGACCCTATTGATGTTATTAGAAAAGCACTTTCAAAAGCACTTGTGTTTTATTATCCATTTGCAGGTAGATTGAGAGAAGGTCCTGGTGGGAAAATTATAGTTGATTGTAATGATGAAGGTGTTTTGTTCATTGAAGCTGATGCTGATGTTAGACTTGAACAATTTGGTGATGCTCTTGTAACGCGCCTTAAGTGTGGTGGTTTCATTTTTGCTCTTCGCCTAAATCATACAATGAGCGACGCAGCAGGTTTGGTCCAATTCATGAATGCCGTGGGCGAAATTTCTCGCGGGATGAACATACCTTCAATCTTACCGGTCTGGCACAGAGATCTTTTAAGTGCAAGAGATCCACCAAGAGTGACATTTCCTCATCGTGAATACGAACGAGTTCCAGATACCAAAGGAACCATTGTCCCCTTAGATGACATGGTTCACCGCTCTTTTTTCTTCGGTCCAACTGAGTTAGCCGCAATTCGCCCTCAATTTCCATCACACTTACAACAACAATCCAAATTCGAAATCATCACTGCATGTCTTTGGCGTTGTCGTACAATCGCATTACAACCTGAAACCGACGAAGAAGTTCGCATAATTTGCGTAAGCAGTACACGTGGGAAGTTTAATCCACCGTTACCAAAAGGTTACTACGGAAACACTTTTGTGTTTCCTGTTGCAGTTACAACTGCAGGAAAACTAATTGAAAATCCGTTGGGATATGCATTAGAGTTAATTAAAAAAGCAAAAACTGAAGTCACTCAAGAATATTTACATTCAATGGCGGATTTAATGGTTATCAAGGGTCGCCCTCATATTACGGTGGTGAGAATGTATTTAGTGTCCGATGTTACACATGCCGGTCTTCGAGATGTTGATTTTGGTTGGGGGAAAGCTGTGTATGGAGGACCAGCTCATGGAGGAGTTGGTGTTGTACCTGGTTTTGCTAGCTTTTATATACCTTTTAAAAATGCTAAAGGAGAGGAAGGGATAATTATACCACTTTGTTTGCCAACTCAAGCCATGGCAAGGTTTGTTATAGAGTTGGATAGTTTGCTTAAGAACAACATTAGCCAGCCTATTAAGAGTGGTCCAAAATCTGGTGTCATTTTTTCTTCATTGTAG 1293 0.396 MAQSLLFKVKRHDPEFIKPSKPTPHIIKLLSDIDDQPTLRFQIPVIQFYKYDPNMNGKDPIDVIRKALSKALVFYYPFAGRLREGPGGKIIVDCNDEGVLFIEADADVRLEQFGDALVTRLKCGGFIFALRLNHTMSDAAGLVQFMNAVGEISRGMNIPSILPVWHRDLLSARDPPRVTFPHREYERVPDTKGTIVPLDDMVHRSFFFGPTELAAIRPQFPSHLQQQSKFEIITACLWRCRTIALQPETDEEVRIICVSSTRGKFNPPLPKGYYGNTFVFPVAVTTAGKLIENPLGYALELIKKAKTEVTQEYLHSMADLMVIKGRPHITVVRMYLVSDVTHAGLRDVDFGWGKAVYGGPAHGGVGVVPGFASFYIPFKNAKGEEGIIIPLCLPTQAMARFVIELDSLLKNNISQPIKSGPKSGVIFSSL* 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g2741 430 Pfam Transferase family 118 403 - -
Tpr1g2741 430 Pfam Transferase family 8 115 - -
Tpr1g2741 430 Gene3D - 117 187 IPR023213 -
Tpr1g2741 430 Gene3D - 7 116 IPR023213 -
Tpr1g2741 430 Gene3D - 188 403 IPR023213 -
Tpr1g2741 430 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 118 414 - -
Tpr1g2741 430 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 8 117 - -
Tpr1g2741 430 PANTHER - 8 117 - -
Tpr1g2741 430 PANTHER - 118 414 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g2741 Tpr-Chr1 31535512 31537833 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g2741 8 391 Monolignol Biosynthesis Gene Families AT5G48930 28.271 4.04e-46 163
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g2741 K19861 - gmx:100797017 627.091