Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g2740 ATGGCCCAATCTCTGTCATTCACAGTAAAGAGGCATGCCCCTGAATTTGTAAAGCCATCAAAACCAACTCCCCATACAATAAAACTACTCTCAGATGTAGATGATCAAGATGGGTTACGTTTTCAAATTCCTATTATACAATTTTACAAATATGATCCAAATATGAAAGGAAAAGACCCTGTTGATGTTATTAGAAAAGCACTTTCAAAAACACTTGTGTTTTATTATCCATTTGCAGGTAGATTGAGGGAAGTTCATGCTAGGAAAGTTATAGTTGATTGTAATGATGAAGGTGTTTTGTTCATTGAAGCTGATGCTGATGTTACTCTTGAAGAATTTGGTGATGCTCTTCAACCTCCTTTTCCTTGTTTGGATGAACTTCTTTATGATGTTCCTGGTTCTTCAGATGTGATTAACACTCCAATTCTGCTTATTCAGGTAACACGCCTCAAATGCGGTGGTTTCATTTTTGCTATTCGTCTAAACCATATAATTAGCGATGCAACTGGTTTGGTCCAATTCATGAAAGCTGTAGGCGAAATTTCTCGCGGGATGAACATACCTTCAATCTCACCAGTATGGCGCCGAGAGCTTCTAAACGCAAGAGATCCACCAAGAGTGACATGTACTCATCGTGAATACGAACAAGTTCCCGACACCAAAGGAACCATTGTCCACTTAGATGATATGGTCCACCGCTCTTTTTTCTTTGGTCCCACTGAGTTATCCGCACTCCGCCCTCAATTTCCATCTCACCTACAACAACAATCCAGATTCGAAATTATCACTGCATGTCTTTGGCGTTGTCGTACAATCGCATTACAACCTGAAACCGACGAAGAAGTTCGCATAATTTGCATATATAATGCACGTGGTAAATTTAATCCACCATTACCAAAAGGTTACTATGGTAATGCTTTCGCATTTCCTGTTGCAATTTCAACCGCAGGAAAATTAATCGAAAACCCATTAGGGTATGCATTGGATTTAATTAAAAAAGCAAAAGCCGACGTCACTGAAGAATATATGCATTCAATGGCGGACTTAATGGTCATCAAGGGTCGGCCTCATTTTACTTCGGTGAGAATGTATTTAGTGTCTGATGTTACACATGTTGGACTTAGAGATGTTGATTTTGGTTGGGGAAAAGCTGTTTATGGAGGACCAGCTCATGGAGGAGTTGGTGTTGTACCTGGTCTTGCTAGCTTTTATATACCTTTTAAAAATGCTAAAGGAGAGGAAGGTTTAGTTATACCGGTTTGTTTGCCAAATCAAGCCATGAAGAGGTTCGTTAAAGAGTTGGATAGTCTCCTTAAGAACAACATTACCCTACCTACTAATGGTGGTCTAAAATCTAGTTTCATTATTTCTTCATTGTAG 1380 0.3913 MAQSLSFTVKRHAPEFVKPSKPTPHTIKLLSDVDDQDGLRFQIPIIQFYKYDPNMKGKDPVDVIRKALSKTLVFYYPFAGRLREVHARKVIVDCNDEGVLFIEADADVTLEEFGDALQPPFPCLDELLYDVPGSSDVINTPILLIQVTRLKCGGFIFAIRLNHIISDATGLVQFMKAVGEISRGMNIPSISPVWRRELLNARDPPRVTCTHREYEQVPDTKGTIVHLDDMVHRSFFFGPTELSALRPQFPSHLQQQSRFEIITACLWRCRTIALQPETDEEVRIICIYNARGKFNPPLPKGYYGNAFAFPVAISTAGKLIENPLGYALDLIKKAKADVTEEYMHSMADLMVIKGRPHFTSVRMYLVSDVTHVGLRDVDFGWGKAVYGGPAHGGVGVVPGLASFYIPFKNAKGEEGLVIPVCLPNQAMKRFVKELDSLLKNNITLPTNGGLKSSFIISSL* 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g2740 459 Gene3D - 8 214 IPR023213 -
Tpr1g2740 459 Gene3D - 215 434 IPR023213 -
Tpr1g2740 459 PANTHER - 8 443 - -
Tpr1g2740 459 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 8 443 - -
Tpr1g2740 459 Pfam Transferase family 12 434 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g2740 Tpr-Chr1 31520059 31522030 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g2740 17 434 Monolignol Biosynthesis Gene Families AT5G48930 30.115 8.69e-50 173
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g2740 K19861 - gmx:100797017 714.146