Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g2738 ATGGATCCCTTTTATCCTGAAAATCTTTTAGGTGAAGTTTTCTTTGATGAACCTCTAACTTCAAATCAAAGTGATTATGCTATGGCACAACAACAACCTTGTCCTACACAAAATCCAAGTGCTTTTGTTCAATATAGAGATCAACCCAAGATTAGTTTTTTGGAAGAAAATTCAAATACCATGAACAAGAGAATGGTTGCATTTTTGAAAAAAAGTTTGCCTTTAGAGAAAAATAAAGTAGCTGAATGTGAAAGAGAACGTGGTTTCAAACACATGATTAGTGAAAGAATGAGAAGACAAAAACAAAGACAGTGTTGCTCCAATTTACATTCAGTGTTGCCTAAAGGAACAAAAACAGATAATAATTCTGTAGTTCAAACAGCAGCTAAGGAAATTCAAAGGCTACAAGGATACAAAGATGAATTGGAGAGGAAAAACTTTGTGCTTGAAGAAAATGTTGAAGTAATTGAGAGAAGAAAACCTCATTATTTGAGAGTACCATACGATGCTACATCTGGAATTATTAGTTCTATGATTGAGACACTCAAATTGTTGAAAAGCAATGGTGTGGAAACTACAAGCATCAAGTCGAAATTTTCTCAACAGGAGTTGTTTGCATTCTTAGAGATTGAAACTGAGATTGCAGAAACTGTTGTGGATAACATTGCAGATGAAATTGACTGGAAGCTTCAACATAAAATCCCGGAAGGTTCCCATAAGCAAATAATATAA 732 0.3388 MDPFYPENLLGEVFFDEPLTSNQSDYAMAQQQPCPTQNPSAFVQYRDQPKISFLEENSNTMNKRMVAFLKKSLPLEKNKVAECERERGFKHMISERMRRQKQRQCCSNLHSVLPKGTKTDNNSVVQTAAKEIQRLQGYKDELERKNFVLEENVEVIERRKPHYLRVPYDATSGIISSMIETLKLLKSNGVETTSIKSKFSQQELFAFLEIETEIAETVVDNIADEIDWKLQHKIPEGSHKQII* 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g2738 243 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 82 148 IPR036638 GO:0046983
Tpr1g2738 243 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 86 135 IPR011598 GO:0046983
Tpr1g2738 243 PANTHER TRANSCRIPTION FACTOR BHLH92 21 224 - -
Tpr1g2738 243 PANTHER TRANSCRIPTION FACTOR BHLH041-RELATED-RELATED 21 224 IPR044658 -
Tpr1g2738 243 SMART finulus 92 141 IPR011598 GO:0046983
Tpr1g2738 243 CDD bHLH_AtbHLH_like 91 143 IPR045239 -
Tpr1g2738 243 Coils Coil 125 159 - -
Tpr1g2738 243 Gene3D - 86 163 IPR036638 GO:0046983
Tpr1g2738 243 Pfam Helix-loop-helix DNA-binding domain 91 136 IPR011598 GO:0046983
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g2738 49 214 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G43650 41.860 1.97e-26 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Tpr1g2738 HLH 3.9e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g2738 - - gmx:100815874 242.276