Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g2736 ATGCCAGAAATTACAAAGTCAATCGTGAGGAAGACAAGCATATCAACAAGGAATACTTGGATTAAGTTTGATGCTAATGGACATAGTTCTTTCCTCAATGTAGACAAGTATGAAATCATGCGTCAAGTTCGTATTGATGCTCGTGATTTTAGAATTCTTGATCCTCTTCTCTCCTATCCTTCCACCATTCTAGGCAGAGAAGATGTTATTGTTCTTAACCTAGAGCATATCAAGGCAATCATAACTGCTAAAGAGGTGTTTTTGCTTGACCCAACTAGTGAAGATGTAGTGCCTGTTGTTAGGGCACTACTAAGGAGATTGTGTACCATTGACACAAATCAAGGAGATGATATTCAAGACAATAGTCCACTTGAGATTGAAGTAGATGAAGATGATGGTATGCTTGATCATAAGACACCTTTTGAATTTCGAGCACTAGAGATATTTCTTGAAGCAATTTGTAGCTTTCTTGATGCACGAGCTGCAGATCTTGAGATGGATATTTATCCTACATTAGATGAACTTACCAACAAGATAAGTAGTCGAAATTTGGAAAAAATTCGTAAATTGAAGAGTGCAATGACAAGGTTGACTGCAAGAGTTCAAAAGGTAAAAGAATCTATTGAACACTTAATGGATGATGATGAAGACATGGCTGACCTATACTTATCAAGAAAATTGGAAGGAGGAGCATCATCACCTATAAGTCAATCAGGTGCTGCAAATAATTGGATTTCATCTCCAAGCACCAAATCAAAAAGTGTAGCAACAATTTTAAGAGATGAAAATGATGTGGATGAACTTGAAATGTTACTTGAGTCTTATTACATGCAAATTGAAGGCACTTTTAGTAGATTATCTACTCTGCGAGGATATATTGATGATACAGAGGATTACATTAATATTCAGATTGACAACCATCGAAATCAATTGATTCAGTTGGAGCTATTTCTTAATGCAGGAGAACTTTGCCTAGCATGTTATTCAGTGGTGACTGGAATACTTGGCATGAATCTTCAATATGATTGGCAAAATGACCATGATTACATGTTCAAATGGGTGGTTATTTTTACAGGATTCTTTTGTACTTTTCTATATCTCATCATAATTGCCTATGCTCGCAAAAAGGGATTGGTTGGATCATGA 1146 0.3595 MPEITKSIVRKTSISTRNTWIKFDANGHSSFLNVDKYEIMRQVRIDARDFRILDPLLSYPSTILGREDVIVLNLEHIKAIITAKEVFLLDPTSEDVVPVVRALLRRLCTIDTNQGDDIQDNSPLEIEVDEDDGMLDHKTPFEFRALEIFLEAICSFLDARAADLEMDIYPTLDELTNKISSRNLEKIRKLKSAMTRLTARVQKVKESIEHLMDDDEDMADLYLSRKLEGGASSPISQSGAANNWISSPSTKSKSVATILRDENDVDELEMLLESYYMQIEGTFSRLSTLRGYIDDTEDYINIQIDNHRNQLIQLELFLNAGELCLACYSVVTGILGMNLQYDWQNDHDYMFKWVVIFTGFFCTFLYLIIIAYARKKGLVGS* 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g2736 381 Coils Coil 187 214 - -
Tpr1g2736 381 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 323 369 IPR045863 -
Tpr1g2736 381 CDD Mrs2_Mfm1p-like 20 378 IPR039204 -
Tpr1g2736 381 PANTHER MAGNESIUM TRANSPORTER MRS2-LIKE PROTEIN 9 381 - -
Tpr1g2736 381 Gene3D Magnesium transport protein CorA, transmembrane region 117 311 - -
Tpr1g2736 381 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 9 381 IPR039204 -
Tpr1g2736 381 Gene3D - 5 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g2736 Tpr-Chr1 31475526 31485318 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g2736 1 354 MRS2 Gene Family AT5G64560 58.449 2.50e-129 374
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g2736 K16075 - egr:104449218 451.44