Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g2732 ATGAAAACTTTCAAACTCCACCACCACTTCTTCACCCTCCTTTTCTTTCTCCTCCTCCTACCCTTCCTTAAATCACAAACTGAAAGACAAGAAAACAACACAGGCTACACCTGCAACAACAATAACAAAAACCAAACACAACTTTATCCATGTCAATCATATGCATACTACAGAGCAACACCACCAAATTACCTCGATTTAGCTACCATTTCAGATCTTTTTTCATTAAGTCGCTTAATGATCTCAAAACCAAGCAATATCTCTTCACCTTCATCCCCTTTAGTCCCTAATCAACCCCTTTTAATCCCTTTAACTTGTTCTTGCAATTTCATCAACACCACTTTTGGTTCAATCTCTTACTCCAATATCACTTACACTATAAAACCAAATGACACTTTTTTCCTTGTTTCAACTATAAACTTTCAAAATCTCACTACTTATCCATCTGTTGAAGTTGTTAATCCTAATCTTGTTCCTACTAATCTCTCTATTGGTGATAATGCTGTTTTCCCTATTTTTTGTAAGTGTCCTGATAAAACCAAAACAAATTCAAGTTTCATGATTTCTTATGTTGTTCAACCTTTTGATAATGTTTCATCAATTGCATCAATGTTTGGAACAACTGAAAAATCCATAATTGATGTGAATGGTGAAAAATTGTATGTTTATGATACAATTTTTGTTCCTGTTAATAAATTACCTGTCTTGAAACAACCTAGTACTCTTGTTCCTTCTCCTCCACCAAGTGGAAATTTTGATGATGGTGATGATGATGATGATAAGAGTGGAACTGTTAGAGGGTTAGCTATTGGATTGGGAATTTTAGGGTTTTTGTTGATTTTGGTTTTAGGGATTTGGCTTTATAGAGAGGTTTTGGTTAAGAAGGAAAAGAAAGGGAGAGATTTGTATTTTGGAGATAAAGGGTATAATGGGAATAATAATGATAATAAGAAGAAGAAACAAATGGATGTGAATTTTATGGCTAATGTTTCTGATTGTTTGGATAAGTATAGAGTTTTTGGATTTGATGAATTAGTTGATGCTACTAATGGGTTTGATGAAAGTTATTTGATTCAAGGAAGTGTTTATAAAGGTGAAATTGATGGACAAGTTTATGCTATTAAGAAGATGAAATGGAATGCTTATGAAGAACTCAAAATCTTGCAGAAGGTAAACCATGGGAATTTGGTGAAGTTGGAAGGATTTTGCATAGAACAAGAAGAATCAAATTGTTATCTAGTCTATGAATATGTTGAAAATGGATCTCTCTACTCATGGCTACATGAAGAGAAAAACCAAAAGTTGAATTGGATAACAAGGCTAAGAATAGCCATTGACATTGCCAATGGTTTATTATACATTCATGAACACACAAGACCAAAAGTTGTACACAAAGACATAAAAAGTAGCAACATTCTCTTGGACTCAAACAAGAGAGCTAAAATTGCGAATTTTGGTCTTGCAAAGAGTGGAATAAATGCAATTACAATGCACATTGTTGGAACACAAGGGTACATTTCGCCTGAATATCTAGCCGATGGTATTGTGTCAACAAAGATGGATGTATTTTCTTTTGGTGTTGTGTTGCTTGAATTGATTTCTGGAAAGGAAGTTGTTGATGATGAGGGAAATGTTTTGTGGGCTAATGCTATTAAAACTTTTGAAGTGAAAAATGAACAAGAAAAGGCTAGAAGACTTAAGGAATGGTTGGATAATGCTATTTTAAGGGAGACATGTTCAATGGAAAGTTTGATGGGTGTACTTAATGTTGCAATTGCTTGTTTGAATAGAGATCCATCAAAGAGGCCTAGCATTATAGATATTGTTTATTCACTTAGTAAATGTGAAGACACTGGATTTGAGGTCTCAGATGATGGGTTTAGTTCACAAAACTTGGTGGCTAGGTGA 1908 0.3401 MKTFKLHHHFFTLLFFLLLLPFLKSQTERQENNTGYTCNNNNKNQTQLYPCQSYAYYRATPPNYLDLATISDLFSLSRLMISKPSNISSPSSPLVPNQPLLIPLTCSCNFINTTFGSISYSNITYTIKPNDTFFLVSTINFQNLTTYPSVEVVNPNLVPTNLSIGDNAVFPIFCKCPDKTKTNSSFMISYVVQPFDNVSSIASMFGTTEKSIIDVNGEKLYVYDTIFVPVNKLPVLKQPSTLVPSPPPSGNFDDGDDDDDKSGTVRGLAIGLGILGFLLILVLGIWLYREVLVKKEKKGRDLYFGDKGYNGNNNDNKKKKQMDVNFMANVSDCLDKYRVFGFDELVDATNGFDESYLIQGSVYKGEIDGQVYAIKKMKWNAYEELKILQKVNHGNLVKLEGFCIEQEESNCYLVYEYVENGSLYSWLHEEKNQKLNWITRLRIAIDIANGLLYIHEHTRPKVVHKDIKSSNILLDSNKRAKIANFGLAKSGINAITMHIVGTQGYISPEYLADGIVSTKMDVFSFGVVLLELISGKEVVDDEGNVLWANAIKTFEVKNEQEKARRLKEWLDNAILRETCSMESLMGVLNVAIACLNRDPSKRPSIIDIVYSLSKCEDTGFEVSDDGFSSQNLVAR* 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g2732 635 Pfam Protein kinase domain 362 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g2732 635 Gene3D LysM domain 176 234 IPR036779 -
Tpr1g2732 635 Gene3D Transferase(Phosphotransferase) domain 1 418 627 - -
Tpr1g2732 635 PANTHER - 9 631 - -
Tpr1g2732 635 SUPERFAMILY Protein kinase-like (PK-like) 337 612 IPR011009 -
Tpr1g2732 635 Pfam LysM domain 190 228 IPR018392 -
Tpr1g2732 635 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 9 631 - -
Tpr1g2732 635 ProSiteProfiles Protein kinase domain profile. 334 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g2732 635 SMART serkin_6 356 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g2732 635 Gene3D Phosphorylase Kinase; domain 1 321 417 - -
Tpr1g2732 635 SMART LysM_2 189 229 IPR018392 -
Tpr1g2732 635 SMART LysM_2 124 171 IPR018392 -
Tpr1g2732 635 ProSitePatterns Serine/Threonine protein kinases active-site signature. 462 474 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g2732 Tpr-Chr1 31439932 31444216 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g2732 1 614 Receptor kinase-like Gene Family AT2G23770 34.317 1.99e-85 278
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Tpr1g2732 Pkinase 1.5e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g2732 - - lang:109352405 851.277