Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g2730 ATGGCAACCACTGAGGAAGAACACTATGCTTCTTTCTCCAACTTACTTCCACAATTCACCAATATTCCCAGCATTCACAAAGCATGGTTTTTCAACTCAAACACACTAGGAATGTTTTCTATTACTCAACCTGATCTTTTAACAAACAACACCAAGACTTTGATTATGTCCTGTAATGTTGATAAACAAGAAAATGATGGTTCTGTTGTTGAGTTTCTATGGACTCCGTTTCCAATTGAGATGTCTGGTGTTGTTTCTATGATTGTTCCGTCGCCTTCTGGTTCTAAGCTTTTGGTGATTCGGAATCAGGAGGAGAAGGAAGGAGGGGTTTCTTGTTGTTTTGAGATTTGGAGTTGTTCTTGCTTGGAGAAGGAGTTTCATATCCCTCAATCAATGCATGGATCAGTGTACAATGATGGATGGTTTGAGGGTGTGTCTTGGAACTCGGATGAAACATTGATAGCATATGTAGCAGAAGGGCCCTCTCCTACAAAGCCAGTATTTAATAATATGGGCTACAAGAGAGGTGGTTGTGCTGAGAAAGATTTTGGTAGCTGGAAAGGTCAAGGAGACTGGGAGGACGATTGGGGAGAAACATATTCTGCAAAGAGACGGCCTACACTTTTTGTTATCAACATCAATAGTGGAGAAGTACAAGCTGTCAAAGGAATTGACAAATCTTTGAGTGTTGGCCAAGTTGTGTGGGCTCCATTTACCGAAGGCTCAGAACAATATCTTGTTTTTGTCGGATGGTCATCTGAGACAAGAAAGCTTGGTATGAAGTACTGCTCTAACAGGCCTTGTGCATTGTATGCTGTTAGAGCACCATATCATGAATCAAAATCCGACGAACCAGAGCACCACTCTTCAACTGAAGAATTGCATGCACTGAACCTGACTCCAACAATAAGCAGTGCGCTTTTTCCGCGATTCAGTCCAAATGGAGAGTTCCTTGTATTTTTATCTGCCAAAAGTGCTGTGGATTCTGGAGTGCACAATGCTACAAATTCACTTCATAGAATTGATTGGCCAACTGATAGAAAACTGTACCGATCTTCCAAAATTTATGACATCATTCCTGTTGTAATGTGCGCCGAGGAGGGTTGTTTCCCCGGGCTCTATTGTACAACTATCCATAATAATCCTTGGCTTACTGACAACTGCACAATGATCATATCATCCATCTGGCACAGCTGTGAAGTTCTACTTTCTGTGAATGTGTTGAGCGGGGAAGTATTACGTATTACCCCAGCAGACTTGACTTTCTCGTGGAATCTTCTTACACTTGATGGGAACAATGTTCTTGCCATTTCCAGCAATCCGGTCAATGTTCCTCAAATTATGTATGGAAATGTCATTGAGAAGGAGAAGAGAAATACTATATGGAGTTGGTCTAAGATATCGAGTCCCATATTCAAATGCTCCGAAAAGGTTAGATCTTTGATGTCGTCTCTCCAGTGCAGTATACTGAAGATCTCTGTCGCAGATGCTTCTAATGATCCAACAAAAGGTGCTGCTAAACCTTTTGAAGCTATATTTGTGTCATCGAAAACCAAGAACAAGGAAGTATTTGATCCATTAATTGTAATCCTTCACGGAGGGCCACAGGACGTGTCTTTGTCACACTTCTCGAAGTCTTGGGCGTTTCTATCTTCAGTCGGATACAGCTTGCTGATTGTAAATTACAGAGGTTCATTAGGATTTGGAGAGGAAGCATTGCAATCTCTTCCAGGGAAAGTTGGATCACAGGATGTCAAGGATGTTCTCTCTGCGATAGATCATGTGATCAACTTGGGTCTTGCTAGTCCGTCCAAGATTTCGGTGATGGGAATTTCACATGGCGGTTTTTTGTCGACTCATTTGATTGGCCAGGCACCAGAGAAGTTTGTAGCAGCGGCCGCAATCAATCCTGTTTGTAACTTTGCACTGATGGTTGGTACAACTGATATTCCTGATTGGTGCTATGTAGAGGCCTTCGGAACCAATGCCAGAAATCATTTTACCGAAGCACCTTCAGAAGAAGATTTGACTCTCTTCTATAGCAAGTCACCTATTTCGCATGTTTCAAAGGTAAAAACACCAACACTTTTCCTTTTAGGTGCTCAAGATCTTCGTGTTCCAATCTTCGATGGACTGCAATATGCTCGAGCTTTAAGAGCGAAAGGAGTCGATTCCAAAATCATCATGTTTCAAAATGATGTTCATGCACTCAAAAGGCCCCAATCTGAATGGGAATGTTTGCTTAACATTGTGGTGTGGTTCAACAAATACTGCAAATAA 2280 0.4171 MATTEEEHYASFSNLLPQFTNIPSIHKAWFFNSNTLGMFSITQPDLLTNNTKTLIMSCNVDKQENDGSVVEFLWTPFPIEMSGVVSMIVPSPSGSKLLVIRNQEEKEGGVSCCFEIWSCSCLEKEFHIPQSMHGSVYNDGWFEGVSWNSDETLIAYVAEGPSPTKPVFNNMGYKRGGCAEKDFGSWKGQGDWEDDWGETYSAKRRPTLFVININSGEVQAVKGIDKSLSVGQVVWAPFTEGSEQYLVFVGWSSETRKLGMKYCSNRPCALYAVRAPYHESKSDEPEHHSSTEELHALNLTPTISSALFPRFSPNGEFLVFLSAKSAVDSGVHNATNSLHRIDWPTDRKLYRSSKIYDIIPVVMCAEEGCFPGLYCTTIHNNPWLTDNCTMIISSIWHSCEVLLSVNVLSGEVLRITPADLTFSWNLLTLDGNNVLAISSNPVNVPQIMYGNVIEKEKRNTIWSWSKISSPIFKCSEKVRSLMSSLQCSILKISVADASNDPTKGAAKPFEAIFVSSKTKNKEVFDPLIVILHGGPQDVSLSHFSKSWAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVKDVLSAIDHVINLGLASPSKISVMGISHGGFLSTHLIGQAPEKFVAAAAINPVCNFALMVGTTDIPDWCYVEAFGTNARNHFTEAPSEEDLTLFYSKSPISHVSKVKTPTLFLLGAQDLRVPIFDGLQYARALRAKGVDSKIIMFQNDVHALKRPQSEWECLLNIVVWFNKYCK* 760
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g2730 759 PANTHER ENZYME-LIKE PROTEIN, PUTATIVE-RELATED 2 759 - -
Tpr1g2730 759 Gene3D alpha/beta hydrolase 507 757 IPR029058 -
Tpr1g2730 759 Coils Coil 755 759 - -
Tpr1g2730 759 PANTHER SERINE PEPTIDASE S9 FAMILY MEMBER 2 759 - -
Tpr1g2730 759 Pfam Prolyl oligopeptidase family 542 758 IPR001375 GO:0006508|GO:0008236
Tpr1g2730 759 Pfam Acylamino-acid-releasing enzyme, N-terminal domain 6 279 IPR045550 -
Tpr1g2730 759 SUPERFAMILY alpha/beta-Hydrolases 526 758 IPR029058 -
Tpr1g2730 759 SUPERFAMILY DPP6 N-terminal domain-like 79 455 - -
Tpr1g2730 759 ProSitePatterns Prolyl endopeptidase family serine active site. 587 617 IPR002471 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g2730 Tpr-Chr1 31420092 31426227 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g2730 526 756 Carbohydrate Esterase AT5G36210 22.944 5.76e-15 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g2730 K01303 - gmx:100812681 1208.36