Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g2729 ATGGTACACCTGTTGCTTCAATTGTTAATGGGGTGTAGTATTCTATCAGCGTCACCCTTTGCATTATCTCTAGCGTCAACCTTTGCATTATCTCAAGCGTCAACCCGTTTCCCTCAAAAACCATTTTCTATTTCACTATCTCATTATTCTCCTTTTCATTATTTCTCATCTTCATCACCTTCCACTTCAACCCGAAACACCGCAACAACAAAATTTTCAGCAATGGATAATCCAAAAAATTCTTCACAAAAAGATTTTCCATCAGGATTAGACGAAGAATCAGAACAACAATACTCACTTCACTCTAATTTACTTCAACAATTCTCCACAATCTCTTCAATCGATAAGGCATGGATTTTCAATTCAAACAAAGATTCTTCTTCACAGGGAATGATGTTTTCTGTGAGTCAACCGAATCTTCTAGCGAACAAGAAACGGAAGTTTATTTTATCGTCTACGGTTACTAAACGGAGTGATGACAGTTCCGTTAAGTTACAGTGGGCTCCGTTTCCAGTTGAGGTGTCTGGAGTTTCGGTTATGGTTCCATCACCTTCTGGTTTGAAGCTTTTGATTGTTCGAAATTCGGAGAGTGATGGTGCTTGTAGGTTTGAAATTTGGAGTGATTCTTGTCTTGAAAAAGAGTTTCATGTACCTCAGTCCAAACATGGTTCTGTGTATACTGATGGATGGTTTGAGGGAATCTCTTGGAACTCGGATGAAACTCTTATAGCATATGTTGCTGAAGAGCCTTCCCCTGCAAAGCCTACATTCAATGATCAGGGCTACAAAAAAAGTGGTTCCGATGACAAGGATTCCAGCAGCTGGAAAGGTCAAGGAGATTGGGAGGAAGACTGGGGCGAAACATATGCGGGAAAGAGGCAGCCTGCACTTTTTGTTATAAACATCACTAGTGGAGAGGTTCAAGCCGTCAAAGGAATTGACAAATCTTTGAGTGTTGGCCAAGTTGTGTGGGCTCCATCAAATGAAGGCTCTGCACAATACTTAGTCTTTGTTGGATGGTCATTTGAGACAAGAAAACTTGGTATTAAGTATTGCTATAACAGGCCTTGTGCATTATATGTTGTTAAAGCACCACCCGAGTCAAAAACTAATGAAAACGAGATCCACTCAGGGGAAGATGCTCAGGCGCTTAACCTAACTCAAACCATAAGTAGTGCTTTCCTTCCACGGTTCAGCCCAGATGGAAAGTTTCTTGTATTTTTATCAGCAAGAAGTTCAGTTGATTCTGGAGCCCATTCTGCTACAAATTCACTTCATAGAATTGACTGGCCTAAGGATGTGAAGTTTGATCAATCTGCAAAAGTTCATGATGTGATACCAGTTGTGCTGTGTGCTGAGGATGATGGCTTTCCTGGGCTTTACTTTTCAAGTATCCTTAACGATCCATGGCTTTCCGATGGCCACACTTTGGTTATACCCTCTGTCTGGCACAGCAGTCAAGTTTTACTTTCGGTCAATGTGTTGAGCGGACAAATAAAACGGATCACTCCTGATGGCTCAAATTTCTCATGGAGTCTCCTTACATTGCACGGGAACAATATTTTTGCCGTTTCTAGCAGTCCAGTAGATATTCCTCAAGTCAAGTATGGAACCTTTGTTGAGAAGGAAGCTGGTAATAATGAATGGAGTTGGTCAGATGTATCAAATCCCATATATAAATGCTCTGACAAGGTAAGTTCTTTGTTGTCCTCTCTTACGTTTAGTGTATTGAAGATCTCAGTCAAGGATGCTTCTGAGAACTCAACTAAAGGTTCTAGTAAACCCTATGAAGCTATATTTGTGTCATCAAAAACTAAGAAAAGTGACACATGTGATCCACTAATTGTGATCCTTCATGGGGGACCACACTCTGTCTCGTTGTCAAGCTTTTCAAAGTCACATGCTTTTCTTTCTTCACTTGGATATAGCTTGTTGATTGTCAACTACAGAGGTTCATTGGGATTTGGTGAGGAGGCCTTACAATCTCTTCCGGGGAATGTTGGATCTCAGGATGTCAATGATGTACTCACAGCTATTGATCATGTCATAGACTTGGGACTTGCAAGTCCATCAAAAATTGCGGTGCTTGGTGGTTCACATGGTGGCTTTTTGACAACCCACTTGATTGGCCAGGCACCAGAGAAGTTTGTTGCAGCAGCTGCTAGAAATCCTGTTTGTAACCTTGCGTTGATGGTTGGTACAACTGATATCCCTGATTGGTGCTATGTTGAGAGCTATGGAATCAAAGGAAGAGATAAGATTACTGAAGCACCTTCAGCAGAGGATCTAACTCTATTTTATAGCAAGTCTCCTATTGCCCACATTGCAAAGGTAAAAACACCAACGGTTTTTCTATTAGGTGCCCAAGATCTTCGCGTCCCAATTTCAACTGGACTGCAATATGCTCGGGCTTTAAAGGAGAAACGAGTACCGGTTAAAGTCATCCTATTTCCAAATGATGTTCATGGAATTGAAAGGCCACAATCCGATTTTGAAAGCTTCCTTAGCATTGCTGCCTGGTTCAACAAGTATTGCAAATGA 2541 0.412 MVHLLLQLLMGCSILSASPFALSLASTFALSQASTRFPQKPFSISLSHYSPFHYFSSSSPSTSTRNTATTKFSAMDNPKNSSQKDFPSGLDEESEQQYSLHSNLLQQFSTISSIDKAWIFNSNKDSSSQGMMFSVSQPNLLANKKRKFILSSTVTKRSDDSSVKLQWAPFPVEVSGVSVMVPSPSGLKLLIVRNSESDGACRFEIWSDSCLEKEFHVPQSKHGSVYTDGWFEGISWNSDETLIAYVAEEPSPAKPTFNDQGYKKSGSDDKDSSSWKGQGDWEEDWGETYAGKRQPALFVINITSGEVQAVKGIDKSLSVGQVVWAPSNEGSAQYLVFVGWSFETRKLGIKYCYNRPCALYVVKAPPESKTNENEIHSGEDAQALNLTQTISSAFLPRFSPDGKFLVFLSARSSVDSGAHSATNSLHRIDWPKDVKFDQSAKVHDVIPVVLCAEDDGFPGLYFSSILNDPWLSDGHTLVIPSVWHSSQVLLSVNVLSGQIKRITPDGSNFSWSLLTLHGNNIFAVSSSPVDIPQVKYGTFVEKEAGNNEWSWSDVSNPIYKCSDKVSSLLSSLTFSVLKISVKDASENSTKGSSKPYEAIFVSSKTKKSDTCDPLIVILHGGPHSVSLSSFSKSHAFLSSLGYSLLIVNYRGSLGFGEEALQSLPGNVGSQDVNDVLTAIDHVIDLGLASPSKIAVLGGSHGGFLTTHLIGQAPEKFVAAAARNPVCNLALMVGTTDIPDWCYVESYGIKGRDKITEAPSAEDLTLFYSKSPIAHIAKVKTPTVFLLGAQDLRVPISTGLQYARALKEKRVPVKVILFPNDVHGIERPQSDFESFLSIAAWFNKYCK* 847
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g2729 846 MobiDBLite consensus disorder prediction 256 279 - -
Tpr1g2729 846 MobiDBLite consensus disorder prediction 71 92 - -
Tpr1g2729 846 MobiDBLite consensus disorder prediction 263 279 - -
Tpr1g2729 846 Pfam Acylamino-acid-releasing enzyme, N-terminal domain 95 365 IPR045550 -
Tpr1g2729 846 PANTHER SERINE PEPTIDASE S9 FAMILY MEMBER 94 846 - -
Tpr1g2729 846 MobiDBLite consensus disorder prediction 71 85 - -
Tpr1g2729 846 SUPERFAMILY DPP6 N-terminal domain-like 170 530 - -
Tpr1g2729 846 ProSitePatterns Prolyl endopeptidase family serine active site. 674 704 IPR002471 GO:0004252|GO:0006508
Tpr1g2729 846 Pfam Prolyl oligopeptidase family 629 845 IPR001375 GO:0006508|GO:0008236
Tpr1g2729 846 PANTHER ENZYME-LIKE PROTEIN, PUTATIVE-RELATED 94 846 - -
Tpr1g2729 846 SUPERFAMILY alpha/beta-Hydrolases 606 845 IPR029058 -
Tpr1g2729 846 Gene3D alpha/beta hydrolase 590 844 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g2729 Tpr-Chr1 31401411 31409920 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g2729 613 829 Carbohydrate Esterase AT5G36210 26.267 2.44e-17 85.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g2729 K01303 - gmx:100803600 1217.99