Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g2726 ATGGAACGGCGGCAACAATCGCCACCGTCTCCACTACCATCACCGCCGTCACGAATCATCCTTGGTAAATACCAACTAACGAAGTTCCTCGGACGCGGAAACTTCGCTAAAGTATACCAAGCACGTTCACTCATCGACGGTTCAACCGTCGCCGTAAAAGTCATCGACAAATCCAAAACGGTTGATGCATCAATGGAGCCACGAATTGTTCGAGAAATCGACGCTATGCGCCGGCTTCAAAATCATCAAAATATCCTTAAGATCCATGAAGTTTTAGCCACGAAAACTAAGATCTACCTTATCGTTGATTTCGCCGGCGGCGGTGAACTTTTCTACAAACTTTCCCGACGAGGTAAGTTCCCGGAGTCATTAGCTCGTCGCTACTTTCAACAACTTGTTTCTGCTCTCTGTTTCTGCCACAAAAACGGCGTCGCTCACCGTGATCTCAAACCGCAGAATCTTCTCCTTGACGCCGACGGTAATCTGAAGGTTTCCGATTTTGGTCTCTCGGCGTTACCGGAACAGCTGAAAAACGGTCTCCTTCATACAGCTTGCGGTACGCCGGCGTACACTGCACCGGAGATTCTCGGTCGGATCGGTTACGACGGATCTAAAGCTGACGCCTGGTCGTGCGGCGTAATTCTCTACGTTCTTCTCGCCGGTCATCTTCCGTTTGATGATTCAAATATTCCGGCGATGTGTAAGAGAATTACTCGCCGGGATTATCAGTTTCCGGAGTGGATTTCGAAACCAGCACGATACTTGATTTATCAATTACTTGACCCGAATCCGAAAACCCGAATTAGGTTAGAAAATGTTATTGGTAACACGTGGTTTAAGAAATCGTTAAGAGAAGAACCTGAAGAGAAAGTTTTTGAATCTGATTTATATAACAAATACTGTTGTGATAGTAAGAAAGTTGAATTTGGGATGAATGCTTTTGATATAATATCGATGTCTTCGGGTTTAGATTTGAGTGGTTTATTCGAAACCGCGTCGATTAGGAGTGAAAAGAGGTTTACTTCTAGTGAAGAAGTTGGTGTGGTAGAAGAGAAAGTGAAGGAAATTGGAGTGAGATTAGGGTTTAGGGTTGAGATTGGGAAAAATGGTACAATTGGGTTAGGGAAAGGGAAAGTTACTATGGTTGTTGAGGTTTTTAAGATTGTGAATGATTTGTTATTGGTTGCTCTTAAATTGGAAAGTGGTGGATTGGAATTTGAAGATCTTCATTGGGATGATTGGAAAATTGGGCTTCAAGATGTAGTTCTTTCTTGGCATAATCATGAATCCAACATGAAAATATGTAATGTTGTTGATTCTTGA 1323 0.4308 MERRQQSPPSPLPSPPSRIILGKYQLTKFLGRGNFAKVYQARSLIDGSTVAVKVIDKSKTVDASMEPRIVREIDAMRRLQNHQNILKIHEVLATKTKIYLIVDFAGGGELFYKLSRRGKFPESLARRYFQQLVSALCFCHKNGVAHRDLKPQNLLLDADGNLKVSDFGLSALPEQLKNGLLHTACGTPAYTAPEILGRIGYDGSKADAWSCGVILYVLLAGHLPFDDSNIPAMCKRITRRDYQFPEWISKPARYLIYQLLDPNPKTRIRLENVIGNTWFKKSLREEPEEKVFESDLYNKYCCDSKKVEFGMNAFDIISMSSGLDLSGLFETASIRSEKRFTSSEEVGVVEEKVKEIGVRLGFRVEIGKNGTIGLGKGKVTMVVEVFKIVNDLLLVALKLESGGLEFEDLHWDDWKIGLQDVVLSWHNHESNMKICNVVDS* 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g2726 440 CDD CIPK_C 312 419 - -
Tpr1g2726 440 SUPERFAMILY Protein kinase-like (PK-like) 20 290 IPR011009 -
Tpr1g2726 440 SMART serkin_6 24 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g2726 440 ProSiteProfiles NAF domain profile. 306 330 IPR018451 GO:0007165
Tpr1g2726 440 Pfam NAF domain 311 365 IPR004041 GO:0007165
Tpr1g2726 440 ProSitePatterns Serine/Threonine protein kinases active-site signature. 144 156 IPR008271 GO:0004672|GO:0006468
Tpr1g2726 440 Gene3D Phosphorylase Kinase; domain 1 20 107 - -
Tpr1g2726 440 ProSiteProfiles Protein kinase domain profile. 24 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g2726 440 Gene3D Transferase(Phosphotransferase) domain 1 108 303 - -
Tpr1g2726 440 Gene3D Kinase associated domain 1, KA1 309 423 - -
Tpr1g2726 440 ProSitePatterns Protein kinases ATP-binding region signature. 30 53 IPR017441 GO:0005524
Tpr1g2726 440 Pfam Protein kinase domain 24 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g2726 440 PANTHER SERINE/THREONINE KINASE 16 428 - -
Tpr1g2726 440 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 16 428 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g2726 Tpr-Chr1 31370190 31372070 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g2726 4 427 Miscellaneous Gene Families AT3G23000 58.005 5.81e-171 484
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Tpr1g2726 Pkinase 1.9e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g2726 K12761 - gmx:100305372 641.728