Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g2695 ATGCATGTTTTGACAATGATGGGGAAAACAAGCAAATGGCTTAGGAATCTTTTGAAAGGGAAGAAAGACAAAGAAAAAGAGAAGGAAAATTGTGAAAATGGAACAGAAAATCCAACTACTCCAATCTCAACAACACCAAAGGAGAAAAGAAGATGGAGTTTTAGGAGATCATCAGCTTCCAAGGAAGTTAATGTTGCAGAATCAAGTGTCACTTCTTCAGTGACACCACAAACTATCAAAGATTCTCAAAATTATCAGAGGAAGCATGTCATGGATGTTGCTGCTGCTGATGGTGTGATCTTCTTGAATTCTGCAGGTTCCAATGGAGGAATTAGAAAGAGTGTTGAAGAGGCTTCTGCTATTAAAATTCAATCTGTTTTCAGATCCTACTTGGCAAGAAAGGCACTGTGTGCTCTTAGAGGAATAGTGAAGCTTCAAGCACTAGTAAGGGGTCACTTAGTGAGAAAACAAACAACTGAGACACTAAGATGCATGCAGGCTTTGGTCATAGCACAGGCAAGAGCTTGTGCTCAAAGGGCTAGAATGTTGTCAGAAGAAAAGACTAATCAAAAGCAATCAACATACAGAAAAATCTCAGAAGACAGTTTATTCATGCATATGTATAATGAAATGGAGAGAAGCTTGGAAGAGAATATAAAGACAGTGGAGATGGATGTTTGTGAATCCAAATGCAACTCAAGAGGCAGAAACAACACTACAGATAATGAACATCATGAATTGTCTCAACATAGATTTTCTGCATATTACTCACCAAATAGTTCATACTCAAAGAAAGAAAACTACAAGGTATCACCAACACCATCAGCAATAACAGATTCAAGTCCAAGAGCATGCAGTGCACATTTTGAGGACTGTTCCTTCAGTACAGCACAGAATAGTCCCTATTACTACTCAGCAGTATCAAGAGTCGACGATTCAAAGCTGCCATTTGCTTTCCCTAAGCAATCCTATGAAGAATCCATGTCGAATGACTATCCATTATTTCCAAATTATATGGCTAATACAGAATCATCAAGAGCTAAAGTCAGATCACAGAGTGCGCCGAAGCAAAGGCCTGACTCGTATGAGAGGCAACCGAGTCGGCGAAGAGCTTCGGTTGAAGGAAGAAATGTTCCAAGGCCTGTGAGGATGGTGAGATCATCTTCACATGTTGGTGCAACTGCACAAAACTACCAATACCCATGGTCAATAAAGCTTGATAAATCATCAGTTTCACTCAGTGAGAGTGAGTGCTGTGGCTCTGCAAGTACAGTACTAACAAACTCTAACTATTGCAGATCTCTTGCTTCATATAATAATAATCCTCATGGACCAAGGTACTGA 1344 0.3966 MHVLTMMGKTSKWLRNLLKGKKDKEKEKENCENGTENPTTPISTTPKEKRRWSFRRSSASKEVNVAESSVTSSVTPQTIKDSQNYQRKHVMDVAAADGVIFLNSAGSNGGIRKSVEEASAIKIQSVFRSYLARKALCALRGIVKLQALVRGHLVRKQTTETLRCMQALVIAQARACAQRARMLSEEKTNQKQSTYRKISEDSLFMHMYNEMERSLEENIKTVEMDVCESKCNSRGRNNTTDNEHHELSQHRFSAYYSPNSSYSKKENYKVSPTPSAITDSSPRACSAHFEDCSFSTAQNSPYYYSAVSRVDDSKLPFAFPKQSYEESMSNDYPLFPNYMANTESSRAKVRSQSAPKQRPDSYERQPSRRRASVEGRNVPRPVRMVRSSSHVGATAQNYQYPWSIKLDKSSVSLSESECCGSASTVLTNSNYCRSLASYNNNPHGPRY* 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g2695 447 MobiDBLite consensus disorder prediction 343 360 - -
Tpr1g2695 447 Pfam IQ calmodulin-binding motif 140 157 IPR000048 GO:0005515
Tpr1g2695 447 Pfam IQ calmodulin-binding motif 118 136 IPR000048 GO:0005515
Tpr1g2695 447 MobiDBLite consensus disorder prediction 20 58 - -
Tpr1g2695 447 PANTHER IQ-DOMAIN 5-RELATED 7 421 - -
Tpr1g2695 447 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 7 421 - -
Tpr1g2695 447 MobiDBLite consensus disorder prediction 361 376 - -
Tpr1g2695 447 ProSiteProfiles IQ motif profile. 116 144 IPR000048 GO:0005515
Tpr1g2695 447 Pfam Protein of unknown function (DUF4005) 321 375 IPR025064 -
Tpr1g2695 447 MobiDBLite consensus disorder prediction 343 388 - -
Tpr1g2695 447 SMART iq_5 138 159 IPR000048 GO:0005515
Tpr1g2695 447 SMART iq_5 115 137 IPR000048 GO:0005515
Tpr1g2695 447 Gene3D - 115 168 - -
Tpr1g2695 447 ProSiteProfiles IQ motif profile. 140 167 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g2695 Tpr-Chr1 30942496 30945558 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g2695 6 435 IQD Protein Family AT4G14750 44.956 3.41e-95 292
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g2695 - - gmx:100817667 549.666