Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g2692 ATGGGAATTAGAGATTTTCGTATCAAAGTCAAGGCATTTAGGTTGAAATTTTTATGCTTAGGAAATAGAAGCATAAGAAGAAATCATGGAAGTGCAAGCAAGCCTTCATGGATGATGCCAATATCACATGGTCATCATGTGGTTGAGCATGATGTGATTAAAGGTGGTGATTCTGATGACTTTGAGTTTGATTCAGTTGTGATACAAAGAGAGCAAATTGGTGAAACTGAATTGTGGTATTTTGGAATCTTTGATGCTTTGATTGGAGATTGTGTTACCAAATATTTGCAATCTAATTATTTTGACAGGAATTTCAAAGAGTCTCAATTGAGGAGAAAAGCCAAAGAAACACTGAAGAGAGCATACCTAGGTGCAAAAACAAAGGTCAGAGAGGCAACAGAGGAAACATGCATAATAGGTTCAACATCAGTGATAATAATAAATGGAGAAAAACTTGTGCTAGCCAACATTGGAGATTACAGAACTGTTTTGTGTAAAGATGGTGTAGCTTATCAGACAAATGGAAGATACAATCAATCAGCCAAGAGACGTTGGTATCGCAGACTTTTTTCAGGTAATGCAAGTGCAACAGGTACAAAGTATTCCAAAGCTTTGGAACTTGTGGTTGGAGGTTATTGGATTGATTCCAGTACTGAATTTGTGATCTTGGCAAGCAATGGCATATGGGAGGTAATGAAGAACCAAGAGGCAGTAAATCTTATCAGACACATAGATGATCCACAAGAAGCAGCTGAGTGTTTGGCTAAGGAAGCATTGGTTAGGAGGAGCAAAAGCAACATTTCATGTTTAATCATTCGATTTGATTGA 828 0.3732 MGIRDFRIKVKAFRLKFLCLGNRSIRRNHGSASKPSWMMPISHGHHVVEHDVIKGGDSDDFEFDSVVIQREQIGETELWYFGIFDALIGDCVTKYLQSNYFDRNFKESQLRRKAKETLKRAYLGAKTKVREATEETCIIGSTSVIIINGEKLVLANIGDYRTVLCKDGVAYQTNGRYNQSAKRRWYRRLFSGNASATGTKYSKALELVVGGYWIDSSTEFVILASNGIWEVMKNQEAVNLIRHIDDPQEAAECLAKEALVRRSKSNISCLIIRFD* 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g2692 275 CDD PP2Cc 64 274 IPR001932 -
Tpr1g2692 275 ProSiteProfiles PPM-type phosphatase domain profile. 60 274 IPR001932 -
Tpr1g2692 275 PANTHER PROTEIN PHOSPHATASE 2C-LIKE PROTEIN 44-RELATED 6 274 - -
Tpr1g2692 275 SUPERFAMILY PP2C-like 67 275 IPR036457 -
Tpr1g2692 275 PANTHER ALPHABET, ISOFORM E-RELATED 6 274 - -
Tpr1g2692 275 Gene3D - 59 275 IPR036457 -
Tpr1g2692 275 Coils Coil 115 135 - -
Tpr1g2692 275 SMART PP2C_4 39 272 IPR001932 -
Tpr1g2692 275 Pfam Protein phosphatase 2C 77 171 IPR001932 -
Tpr1g2692 275 Pfam Protein phosphatase 2C 214 267 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g2692 Tpr-Chr1 30912956 30916441 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g2692 1 274 PP2C-type Phosphatase Gene Family AT3G23360 43.321 3.01e-69 213
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g2692 K19704 - gmx:100794054 399.438