Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g2677 ATGGAATCTACAAGGCGTTGGTTTAGTAAGTTCAGGCCAAAAAGTAAGGAAGCTGCAAGCAAGGCAAAAGAAGGGTCTAAACCCCCAATAAGCGAAGAACCACCTTCAACTGTAACGAAACAGAAGGTTGATGCTGCAAAGCATTACATAGAAAATCATTATAAGAAGCAGATGCAGAGCCTGCAGGAGAGGAAGGAAAGACGTAATATGCTAGAAAAGAAATTGGCTGATGCCGAAGTCTCCGAGCAAGAGCAGAACAATTTGCTTAAGTATTTGGAGAAAAAGGAGACAGAAATCATGCGCCTTCAGCGGCATAAGATGGGTGCCGATGACTTTGAGCCCCTGACTATGATCGGAAAAGGTGCATTTGGAGAGGTTAGAGTCTGCCGGGAGAAGGCAACTGGTCATGTATATGCTATGAAGAAGCTTAAGAAATCCGAGATGCTTCGTAGAGGACAGGTTGAACATGTCAAGGCTGAGAGGAACCTTCTTGCAGAAGTTGATAGCAATTGCATTGTAAAACTTTATTGTTCCTTTCAAGATGACGAGTATTTATATCTCGTAATGGAGTATCTACCTGGTGGAGATATGATGACGTTGCTGATGAGGAAAGATATACTGACTGAAGATGAAGCTAGGTTCTATGTCGGGGAGACTGTTCTAGCCATAGAGTCCATTCATAAACATAATTATATTCATAGAGATATCAAGCCTGACAACTTGCTGCTGGATAAACATGGTCACATGAAATTATCAGATTTCGGATTATGTAAGCCGCTGGACTGCAGTAACCTTCAGGAAAAAGACTTATCTGTTGGTATGAACAGAAGTGGACTCCTTCAAAGTGATGGACGTCCTTCAGCTCCTAAGCGCTCACAACAGGAGCAACTGCAGCACTGGCAGAAAAATCGCAGAATGCTAGCCTATTCTACGGTTGGAACACCGGATTATATTGCTCCAGAAGTTCTATTGAAGAAAGGATATGGCGTGGAATGTGACTGGTGGTCTCTAGGAGCCATAATGTATGAAATGCTTGTTGGGTATCCTCCGTTTTATTCAGACGAACCAATGGCAACTTGTAGAAAGATAGTAAATTGGAGAACTACTTTGAAATTTCCGGAAGAAGCTAAACTTTCACCAGAGGCAAAGGATCTTATTTGCAGACTCCTATGCAATGTGGAGCAGAGGCTTGGAACTAAAGGAGCTGATGAAATAAAGGCTCATGCATGGTTTGAAGGTACTGAGTGGGACAAATTGTACCAAATGAAAGCTGCTTTTATGCCTGAGGTCAATGACGAATTAGATACTCAAAATTTTGAGAAATTTGAAGAGGCGGACAAGCAAACTGAACCTTCCTCAAAGGCAGGGCCATGGAGAAAGATGCTTCCATCTAAAGATATTAACTTTGTTGGTTACACATACAAGAATTATGAAATTGTGGATGAAAATGTAATACCTGGAATTGCTGAATTGAGGAAGAAGACAAAACCTAAAAGGCCATCAATTAAGTCCTTATTTGCTGAAGATGAATCATCTAAGGCTTCTTCTAATCAACCTGTTAGAGGGAGCTTCTTAAATCTCTTACCTCCTCAGATGGAAGTTCCAGAGAAAAATGTATCACAATGA 1626 0.4127 MESTRRWFSKFRPKSKEAASKAKEGSKPPISEEPPSTVTKQKVDAAKHYIENHYKKQMQSLQERKERRNMLEKKLADAEVSEQEQNNLLKYLEKKETEIMRLQRHKMGADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYCSFQDDEYLYLVMEYLPGGDMMTLLMRKDILTEDEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDKHGHMKLSDFGLCKPLDCSNLQEKDLSVGMNRSGLLQSDGRPSAPKRSQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGVECDWWSLGAIMYEMLVGYPPFYSDEPMATCRKIVNWRTTLKFPEEAKLSPEAKDLICRLLCNVEQRLGTKGADEIKAHAWFEGTEWDKLYQMKAAFMPEVNDELDTQNFEKFEEADKQTEPSSKAGPWRKMLPSKDINFVGYTYKNYEIVDENVIPGIAELRKKTKPKRPSIKSLFAEDESSKASSNQPVRGSFLNLLPPQMEVPEKNVSQ* 542
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g2677 541 SUPERFAMILY Protein kinase-like (PK-like) 87 458 IPR011009 -
Tpr1g2677 541 SMART serkin_6 112 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g2677 541 Gene3D Phosphorylase Kinase; domain 1 102 197 - -
Tpr1g2677 541 Pfam Protein kinase C terminal domain 430 474 IPR017892 GO:0004674|GO:0005524|GO:0006468
Tpr1g2677 541 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 34 512 - -
Tpr1g2677 541 MobiDBLite consensus disorder prediction 497 541 - -
Tpr1g2677 541 SMART pkinase_C_6 412 476 IPR000961 GO:0004674|GO:0005524|GO:0006468
Tpr1g2677 541 Gene3D Transferase(Phosphotransferase) domain 1 198 428 - -
Tpr1g2677 541 CDD STKc_NDR_like 110 475 - -
Tpr1g2677 541 MobiDBLite consensus disorder prediction 1 28 - -
Tpr1g2677 541 MobiDBLite consensus disorder prediction 1 41 - -
Tpr1g2677 541 ProSitePatterns Serine/Threonine protein kinases active-site signature. 231 243 IPR008271 GO:0004672|GO:0006468
Tpr1g2677 541 ProSitePatterns Protein kinases ATP-binding region signature. 118 141 IPR017441 GO:0005524
Tpr1g2677 541 MobiDBLite consensus disorder prediction 508 524 - -
Tpr1g2677 541 Pfam Protein kinase domain 114 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g2677 541 ProSiteProfiles Protein kinase domain profile. 112 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g2677 541 ProSiteProfiles AGC-kinase C-terminal domain profile. 412 484 IPR000961 GO:0004674|GO:0005524|GO:0006468
Tpr1g2677 541 PANTHER SERINE/THREONINE-PROTEIN KINASE 34 512 - -
Tpr1g2677 541 Coils Coil 54 81 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Tpr1g2677 Tpr-Chr1 30769148 30776339 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g2677 17 535 AGC Kinase Gene Family AT4G14350 82.885 0.0 893
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Tpr1g2677 Pkinase 7.8e-65 CL0016
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g2677 K08790 - gmx:100795087 986.482
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g3319 6 35811376 35818723 Tpr1g2677 1 30769148 30776339 PCT