Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tpr1g2677 | ATGGAATCTACAAGGCGTTGGTTTAGTAAGTTCAGGCCAAAAAGTAAGGAAGCTGCAAGCAAGGCAAAAGAAGGGTCTAAACCCCCAATAAGCGAAGAACCACCTTCAACTGTAACGAAACAGAAGGTTGATGCTGCAAAGCATTACATAGAAAATCATTATAAGAAGCAGATGCAGAGCCTGCAGGAGAGGAAGGAAAGACGTAATATGCTAGAAAAGAAATTGGCTGATGCCGAAGTCTCCGAGCAAGAGCAGAACAATTTGCTTAAGTATTTGGAGAAAAAGGAGACAGAAATCATGCGCCTTCAGCGGCATAAGATGGGTGCCGATGACTTTGAGCCCCTGACTATGATCGGAAAAGGTGCATTTGGAGAGGTTAGAGTCTGCCGGGAGAAGGCAACTGGTCATGTATATGCTATGAAGAAGCTTAAGAAATCCGAGATGCTTCGTAGAGGACAGGTTGAACATGTCAAGGCTGAGAGGAACCTTCTTGCAGAAGTTGATAGCAATTGCATTGTAAAACTTTATTGTTCCTTTCAAGATGACGAGTATTTATATCTCGTAATGGAGTATCTACCTGGTGGAGATATGATGACGTTGCTGATGAGGAAAGATATACTGACTGAAGATGAAGCTAGGTTCTATGTCGGGGAGACTGTTCTAGCCATAGAGTCCATTCATAAACATAATTATATTCATAGAGATATCAAGCCTGACAACTTGCTGCTGGATAAACATGGTCACATGAAATTATCAGATTTCGGATTATGTAAGCCGCTGGACTGCAGTAACCTTCAGGAAAAAGACTTATCTGTTGGTATGAACAGAAGTGGACTCCTTCAAAGTGATGGACGTCCTTCAGCTCCTAAGCGCTCACAACAGGAGCAACTGCAGCACTGGCAGAAAAATCGCAGAATGCTAGCCTATTCTACGGTTGGAACACCGGATTATATTGCTCCAGAAGTTCTATTGAAGAAAGGATATGGCGTGGAATGTGACTGGTGGTCTCTAGGAGCCATAATGTATGAAATGCTTGTTGGGTATCCTCCGTTTTATTCAGACGAACCAATGGCAACTTGTAGAAAGATAGTAAATTGGAGAACTACTTTGAAATTTCCGGAAGAAGCTAAACTTTCACCAGAGGCAAAGGATCTTATTTGCAGACTCCTATGCAATGTGGAGCAGAGGCTTGGAACTAAAGGAGCTGATGAAATAAAGGCTCATGCATGGTTTGAAGGTACTGAGTGGGACAAATTGTACCAAATGAAAGCTGCTTTTATGCCTGAGGTCAATGACGAATTAGATACTCAAAATTTTGAGAAATTTGAAGAGGCGGACAAGCAAACTGAACCTTCCTCAAAGGCAGGGCCATGGAGAAAGATGCTTCCATCTAAAGATATTAACTTTGTTGGTTACACATACAAGAATTATGAAATTGTGGATGAAAATGTAATACCTGGAATTGCTGAATTGAGGAAGAAGACAAAACCTAAAAGGCCATCAATTAAGTCCTTATTTGCTGAAGATGAATCATCTAAGGCTTCTTCTAATCAACCTGTTAGAGGGAGCTTCTTAAATCTCTTACCTCCTCAGATGGAAGTTCCAGAGAAAAATGTATCACAATGA | 1626 | 0.4127 | MESTRRWFSKFRPKSKEAASKAKEGSKPPISEEPPSTVTKQKVDAAKHYIENHYKKQMQSLQERKERRNMLEKKLADAEVSEQEQNNLLKYLEKKETEIMRLQRHKMGADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYCSFQDDEYLYLVMEYLPGGDMMTLLMRKDILTEDEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDKHGHMKLSDFGLCKPLDCSNLQEKDLSVGMNRSGLLQSDGRPSAPKRSQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGVECDWWSLGAIMYEMLVGYPPFYSDEPMATCRKIVNWRTTLKFPEEAKLSPEAKDLICRLLCNVEQRLGTKGADEIKAHAWFEGTEWDKLYQMKAAFMPEVNDELDTQNFEKFEEADKQTEPSSKAGPWRKMLPSKDINFVGYTYKNYEIVDENVIPGIAELRKKTKPKRPSIKSLFAEDESSKASSNQPVRGSFLNLLPPQMEVPEKNVSQ* | 542 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tpr1g2677 | 541 | SUPERFAMILY | Protein kinase-like (PK-like) | 87 | 458 | IPR011009 | - | |
Tpr1g2677 | 541 | SMART | serkin_6 | 112 | 411 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Tpr1g2677 | 541 | Gene3D | Phosphorylase Kinase; domain 1 | 102 | 197 | - | - | |
Tpr1g2677 | 541 | Pfam | Protein kinase C terminal domain | 430 | 474 | IPR017892 | GO:0004674|GO:0005524|GO:0006468 | |
Tpr1g2677 | 541 | PANTHER | NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE | 34 | 512 | - | - | |
Tpr1g2677 | 541 | MobiDBLite | consensus disorder prediction | 497 | 541 | - | - | |
Tpr1g2677 | 541 | SMART | pkinase_C_6 | 412 | 476 | IPR000961 | GO:0004674|GO:0005524|GO:0006468 | |
Tpr1g2677 | 541 | Gene3D | Transferase(Phosphotransferase) domain 1 | 198 | 428 | - | - | |
Tpr1g2677 | 541 | CDD | STKc_NDR_like | 110 | 475 | - | - | |
Tpr1g2677 | 541 | MobiDBLite | consensus disorder prediction | 1 | 28 | - | - | |
Tpr1g2677 | 541 | MobiDBLite | consensus disorder prediction | 1 | 41 | - | - | |
Tpr1g2677 | 541 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 231 | 243 | IPR008271 | GO:0004672|GO:0006468 | |
Tpr1g2677 | 541 | ProSitePatterns | Protein kinases ATP-binding region signature. | 118 | 141 | IPR017441 | GO:0005524 | |
Tpr1g2677 | 541 | MobiDBLite | consensus disorder prediction | 508 | 524 | - | - | |
Tpr1g2677 | 541 | Pfam | Protein kinase domain | 114 | 411 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Tpr1g2677 | 541 | ProSiteProfiles | Protein kinase domain profile. | 112 | 411 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Tpr1g2677 | 541 | ProSiteProfiles | AGC-kinase C-terminal domain profile. | 412 | 484 | IPR000961 | GO:0004674|GO:0005524|GO:0006468 | |
Tpr1g2677 | 541 | PANTHER | SERINE/THREONINE-PROTEIN KINASE | 34 | 512 | - | - | |
Tpr1g2677 | 541 | Coils | Coil | 54 | 81 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tpr1g2677 | Tpr-Chr1 | 30769148 | 30776339 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Tpr1g2677 | 17 | 535 | AGC Kinase Gene Family | AT4G14350 | 82.885 | 0.0 | 893 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | AGC_NDR | Tpr1g2677 | Pkinase | 7.8e-65 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tpr1g2677 | K08790 | - | gmx:100795087 | 986.482 |