Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tpr1g2672 | ATGGCAGATCCCGATACTTTTACGAATCCTGACCGGGATATTGAACAAGCATTGGTTACTTTGAAAAGAGGAACTCAGTTAGTCAAGTATTGTCGAAAAGGGAAGCCAAAACTTTGTAATTTCAGGCTTTCACAGGATGAAACATCCCTGATTTGGATTTCTCATGGAAAGGAAAAGCATCTGAAGTTGGCTTCTGTTTTGCGCATCATCTCGGGACAGAGAACAGCTGTCTTTAGAAGATTTTTGCGCCCTGAAAAGGATTATCTATCATTTTCACTTATTCATAAAAAAGGCGAAAGATCACTTGATCTGATCTGCAAGGATACAGCTGAAGTTGAGATATGGCTTTCGGGCCTAAAGGAATTAATTTCTACTGGGCATAGAAAGCGGCGCTCTTCAAGTGAATTGACAGATGATAGCGTTGATTCTTCTCCGATTGATCGTCCTTTTGGTGGGGCACTAGAGTTGAATTCAACCATTTCCACTGGCAGGTTTTCTTTTGAATCAGCTTTTCGTGAACCCACATCAAGTAGAAGACGGTCAGATGTGGGGTCAGATAGTGCGAGTATGCCAGTAAGGACAAGTGTTGGAGATTGTTCCCGTATTAGTGTGTCAAGTGTTGGCTATGCTTGTAGTGTAGGATCAGGGCCAGATGACATTGAGTCTCTAGGTGATGTTTTCATATGGGGAGAGGTTTGGGTCGACGGAAATTCCTCTGATGGGTTAGGGAGTCAAGTCCCTTCCAAGACAGATGTTCATATTCCTAAGCTATTAGAGTCTAACGTTGTTCTCGATGTTCATCAGATAGAACCCGGTGTAAGTCATATTGCTCTAGTAACACGGCAAGGAGAGGTTTTTACCTGGGGAGAGGACTCTGGCGGGAGACTTGGACATGGAATCGATAAAGATTTTGGTAAACCACGTCTTGTTGAGTCCATAGCAGTTACTAATATGTGTTTTGTTGCTTGTGGTGAATATCATACATGTGCTGTAGCTGCATCTGGGGATCTATACACATGGGGTGACGGTACACATAATGCAGGAATTCTAGGTCATGGAACCGATGTTAGCCATTGTATACCGAAGAGAGTCACCGGCTTTTTAGAAGGACTTCAGGTTGTATGTATAGCCTGTGGCTCATGGCATACAGCATTGATAACCTCCAATGGGAAACTTTTTACCTTCGGAGATGGAATGCTCGGTGTCTTGGGGCATGGAGATAGAGAGAGTGTTTCATATCCAAAGGAGGTAGAGTTATCGAGTGGACACAAGGCTATTAAGGTTGCATGTGGAGTGTGGCACACTGCAGCCATTATAGAGGTTAATGATGAATCAGGTTCAAATGCTTCTGCATCAAAGAGACTATTCACATGGGGTGATGGCGATCAATATCGATTAGGTCATGGTAACAAGGAAACCTATCTTCAACCGACTTGTGTGGCTACACTTGCTGAATATAATTTTCAACAGGTTGCATGCGGACAAAGTTTCACTGTTGCACTAACCGCATCTGGACATGTTTTTACTGTGGGAAGCACAGCATACGGTCAACTAGGAAATCCAAACTCTGATGGAAAAGTACCGATTCTAGTAAGAGATAAATTACAAGGTGAAACTGTTGAAGAAATATCATGCGGCACACATCATGTTGCTGCATTGACTTCAAGAAGTGAACTATATACTTGGGGAAGAGGTGCGAATGGAAGATTAGGACATGGAGACACGGAAGATCAGAAAACTCCAACGTTGGTGGAAGCCTTGAAAGAAAGGCATGTAAAGAGTATTGCATGCGGCGCAAATTTTACAACTTCTATATGCATACATAAATGGGTTTCTGGGAATGACCAATCGGTTTGCTCCGGTTGTAGACAACCTTTTGGTTTTACTAGAAAAAGGCATAATTGTTATCATTGTGGATTGGTGCATTGTCATCCTTGTAGTTCGAAAAAGGCCCTGAAAGCAGCATTGGCTCCATCACCTAGCAAACCACATCGCGTGTGTGATGCTTGTCACGGAAAGCTTAAAGGTTCTGATAGTCTTAACACTTCCAATTATAATAGAGAAATTAGTCGTCCAGTTAGTACCTCACATGGAAAAAATGACAGGGGAGAGGTAAAGCCTTCAAAAATTCTTTTGACTTCTACTGCCATAGGTCTAGTGAAATATCTTGACTTAAGAAGTGCTATGCTTGGAAGTACACGCGAACCTTCTCCCACGGGAAGAGAGGCTCAAAATCCGTTGAGTTTGCAATTGAAAGATGTCATATTTCCAGGTTCATCAAGTTCCACACAGAATGCTCCCAGGCCTCTTATTATGCCGCAAAGTCAACCACCAACTGCACCTTCATCAGCTACTTCAAGACCAACCTCACCATATTCAAAAAGACCGCCTAGCCCGACACGTTCTAGTTCCCCTGGATTTTCAAGAACCATTATTGATAACTTAAAGAAGAAAAATGAGCTTTTGAATCAAGAAGTCTCAAAGTTGCAAAACCATATTCGAAGTTTAAAGCAAAAGGGTGACATGCAAGATATGAAGATTAACGAGCTTCAGAAAAATATTGAGGAAGCACATCTATTGGCTGGAGAGGAATATTCTAAGCATAGAGAAGTAAGGGATTTCATCAAGTCTATGGCAGATGAGTTGAGGGAAGTGACAGAAAAGTTGCCACCAGAGATTCCTGGCAGTGAAACCTTGAAAGAGATCCATGCTCAAGCACAATATATTCTGAAAGAAAATGTAGAATTTGAATCTTCTTCATTCCAATCGGGCTTTAAGTCTGAGAAACAAACTGCACATGGTGTACCAGCATCAGAAGGAAATGATGAAGCTTCTGAGGCTGTTCCATCTATAGATGGAGGAAATGTTCATCACAAATGCAGAAGATCGTATGTATCGAGTCCAGGAGTGTCTCCACCAAGTTCAGAAAATCGTTCCAAATCACCTGAATCTCACAATCCTGTGAGTGAAGAAGAAACATCTATCATTGAACAATTTGAACATGGTGTCTATGTCACAGTCAGTTTACTACCTGGTGACGTAAAAGTTTTCAAACGTGTTCGATTCAGTAAGAGAAGATTCAATGAGCAACAAGCAGAAGAATGGTGGAACAATAACAGAGATAGGTTGCAAAGGAGATACAGTCTACCACCTGAAATGATTGGTTCGTCGACCACCTCACCTCATGCTGAAGAAAATGGTTAG | 3204 | 0.4195 | MADPDTFTNPDRDIEQALVTLKRGTQLVKYCRKGKPKLCNFRLSQDETSLIWISHGKEKHLKLASVLRIISGQRTAVFRRFLRPEKDYLSFSLIHKKGERSLDLICKDTAEVEIWLSGLKELISTGHRKRRSSSELTDDSVDSSPIDRPFGGALELNSTISTGRFSFESAFREPTSSRRRSDVGSDSASMPVRTSVGDCSRISVSSVGYACSVGSGPDDIESLGDVFIWGEVWVDGNSSDGLGSQVPSKTDVHIPKLLESNVVLDVHQIEPGVSHIALVTRQGEVFTWGEDSGGRLGHGIDKDFGKPRLVESIAVTNMCFVACGEYHTCAVAASGDLYTWGDGTHNAGILGHGTDVSHCIPKRVTGFLEGLQVVCIACGSWHTALITSNGKLFTFGDGMLGVLGHGDRESVSYPKEVELSSGHKAIKVACGVWHTAAIIEVNDESGSNASASKRLFTWGDGDQYRLGHGNKETYLQPTCVATLAEYNFQQVACGQSFTVALTASGHVFTVGSTAYGQLGNPNSDGKVPILVRDKLQGETVEEISCGTHHVAALTSRSELYTWGRGANGRLGHGDTEDQKTPTLVEALKERHVKSIACGANFTTSICIHKWVSGNDQSVCSGCRQPFGFTRKRHNCYHCGLVHCHPCSSKKALKAALAPSPSKPHRVCDACHGKLKGSDSLNTSNYNREISRPVSTSHGKNDRGEVKPSKILLTSTAIGLVKYLDLRSAMLGSTREPSPTGREAQNPLSLQLKDVIFPGSSSSTQNAPRPLIMPQSQPPTAPSSATSRPTSPYSKRPPSPTRSSSPGFSRTIIDNLKKKNELLNQEVSKLQNHIRSLKQKGDMQDMKINELQKNIEEAHLLAGEEYSKHREVRDFIKSMADELREVTEKLPPEIPGSETLKEIHAQAQYILKENVEFESSSFQSGFKSEKQTAHGVPASEGNDEASEAVPSIDGGNVHHKCRRSYVSSPGVSPPSSENRSKSPESHNPVSEEETSIIEQFEHGVYVTVSLLPGDVKVFKRVRFSKRRFNEQQAEEWWNNNRDRLQRRYSLPPEMIGSSTTSPHAEENG* | 1068 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tpr1g2672 | 1067 | SUPERFAMILY | RCC1/BLIP-II | 224 | 610 | IPR009091 | - | |
| Tpr1g2672 | 1067 | Gene3D | - | 184 | 449 | IPR009091 | - | |
| Tpr1g2672 | 1067 | ProSiteProfiles | Regulator of chromosome condensation (RCC1) repeat profile. | 557 | 608 | IPR000408 | - | |
| Tpr1g2672 | 1067 | ProSiteProfiles | Zinc finger FYVE/FYVE-related type profile. | 613 | 675 | IPR017455 | - | |
| Tpr1g2672 | 1067 | ProSiteProfiles | Regulator of chromosome condensation (RCC1) repeat profile. | 335 | 389 | IPR000408 | - | |
| Tpr1g2672 | 1067 | ProSitePatterns | Regulator of chromosome condensation (RCC1) signature 2. | 428 | 438 | IPR000408 | - | |
| Tpr1g2672 | 1067 | MobiDBLite | consensus disorder prediction | 773 | 808 | - | - | |
| Tpr1g2672 | 1067 | CDD | PH_PLC_plant-like | 12 | 124 | - | - | |
| Tpr1g2672 | 1067 | MobiDBLite | consensus disorder prediction | 1051 | 1067 | - | - | |
| Tpr1g2672 | 1067 | SUPERFAMILY | FYVE/PHD zinc finger | 609 | 681 | IPR011011 | - |
Showing 1 to 10 of 44 entries
Duplication type information
Functional genes information
Pathway information