LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Tpr1g2665	ATGGCTGGAGAACTAGGAGTGCTAAATGCACTAGATGTGGCAAAGACACAATTGTACCATTTCACTACCATTATCATAGCTGGAATGGGTTTCTTCACTGATGCGTATGATCTTTTCTGCATTTCCATGGTCACAAAATTACTTGGAAGAATATATTACACAGAACCAAATGCACCAAAACCAGGAACACTTCCACCAAGTGTTCAATCAGCTGTAACCGGCGTCGCGCTAGTCGGGACTCTAGCAGGCCAATTATTCTTTGGTTGGCTTGGAGACAAAATGGGAAGAAAAAAAGTTTATGGTTTAACACTTATTCTCATGGTTGTTTGTTCTGTTGCCTCAGGACTCTCTTTTGGATCAAGTCCAAAGAGTGTTATGGCAACACTTTGTTTCTTTAGGTTTTGGCTTGGTTTTGGAATTGGTGGTGATTACCCTCTTTCGGCTACAATCATGTCGGAATATGCGAATAAAAAAACTAGAGGAGCTTTTATTGCTGCTGTTTTTGCTATGCAAGGTTTTGGTATCTTAGGTGGTGGAATTGTTGCATTGATTGTGGCTTCTATATTTGATCACAAATATAATGCTCCTACTTATGAAGAAAATGCAGCGGCGTCGTTGGTGTTGCCGCAATTTGATTATGTTTGGAGACTTATTCTTATGTTTGGTGCTCTTCCGGCTGCATTGACGTACTATTGGCGAATGAAAATGCCCGAAACGGCTCGTTACACGGCTCTCGTCGCTAAGAACGCGAAACAGGCTACCGCGGATATGTCGAAGGTTTTGCAAGTTGAACTTGAAGTTGAAGAGGAAAAGGTGGAAAAGTATACGGGCAACGAGAGAAATCAGTATGGCTTGTTCAGCAAGGAATTCGTGAAGCGACACGGTTTGCATTTGCTCGGAACATGTAGTACTTGGTTTTTGTTGGATATTGCTTTCTATAGTCAGAATCTTTTCCAAAAGGATATTTTTTCCGCAATCGGATGGATACCTCCGGCAAAAGAAATGAATGCAATTCATGAGGTTTACAAGATTGCAAGAGCACAAACACTTATCGCCTTATGTAGTACTGTTCCGGGTTATTGGTTCACGGTAGCGTTGATCGATTACATGGGCCGTTTCGCTATCCAAATGATGGGATTCTTCTTCATGACTGTTTTCATGTTTGCTCTTGCTATACCATATGATCATTGGAGAGATAAAGACAATAAATTTGGGTTTGTTGCAATGTACTCACTCACATTCTTCTTTGCTAATTTTGGTCCAAATGCTACAACATTTGTTGTTCCGGCGGAGATTTTCCCGGCTAGGTTAAGGTCCACTTGTCATGGAATTTCAGCTGCTGCAGGAAAGGCAGGAGCAATTGTTGGTGCATTTGGTTTCTTGTATGCTGCACAAAGTAAAGATCCTACTCAGACCGATAAAGGGTATCCAACCGGTATTGGGATTAAGAACTCGCTTATTATGCTTGGCGTGATCAACTTTGCTGGTATGTTGTTCACTTTACTTGTTCCGGAATCAAAGGGGAAATCATTGGAAGAGTTAACCGGAGAGAATGAAGGAGAAGGTGATATTGAGGCCACTCCGCAAGAAGGATCAAGGTTTCCAAATGCTGCCACAGCCTAG	1623	0.419	MAGELGVLNALDVAKTQLYHFTTIIIAGMGFFTDAYDLFCISMVTKLLGRIYYTEPNAPKPGTLPPSVQSAVTGVALVGTLAGQLFFGWLGDKMGRKKVYGLTLILMVVCSVASGLSFGSSPKSVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILGGGIVALIVASIFDHKYNAPTYEENAAASLVLPQFDYVWRLILMFGALPAALTYYWRMKMPETARYTALVAKNAKQATADMSKVLQVELEVEEEKVEKYTGNERNQYGLFSKEFVKRHGLHLLGTCSTWFLLDIAFYSQNLFQKDIFSAIGWIPPAKEMNAIHEVYKIARAQTLIALCSTVPGYWFTVALIDYMGRFAIQMMGFFFMTVFMFALAIPYDHWRDKDNKFGFVAMYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAAAGKAGAIVGAFGFLYAAQSKDPTQTDKGYPTGIGIKNSLIMLGVINFAGMLFTLLVPESKGKSLEELTGENEGEGDIEATPQEGSRFPNAATA*	541

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Tpr1g2665	540	MobiDBLite	consensus disorder prediction	512	540	-	-
	Tpr1g2665	540	Pfam	Sugar (and other) transporter	25	514	IPR005828	GO:0016021\|GO:0022857\|GO:0055085
	Tpr1g2665	540	CDD	MFS_PhT	24	507	-	-
	Tpr1g2665	540	PANTHER	HIGH AFFINITY INORGANIC PHOSPHATE TRANSPORTER	3	529	-	-
	Tpr1g2665	540	ProSiteProfiles	Major facilitator superfamily (MFS) profile.	23	508	IPR020846	GO:0022857
	Tpr1g2665	540	SUPERFAMILY	MFS general substrate transporter	12	514	IPR036259	-
	Tpr1g2665	540	PANTHER	SOLUTE CARRIER FAMILY 22 MEMBER	3	529	-	-
	Tpr1g2665	540	TIGRFAM	2A0109: phosphate:H+ symporter	10	517	IPR004738	GO:0005315\|GO:0006817\|GO:0016021
	Tpr1g2665	540	Gene3D	MFS general substrate transporter like domains	269	529	IPR036259	-
	Tpr1g2665	540	Gene3D	MFS general substrate transporter like domains	19	267	IPR036259	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Tpr1g2665	Tpr-Chr1	30630858	30634935	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Tpr1g2665	4	519	Inorganic Solute Cotransporters	AT5G43360	80.814	0.0	863

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Tpr1g2665	K08176		-	gmx:100780201	904.049

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