Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g2665 ATGGCTGGAGAACTAGGAGTGCTAAATGCACTAGATGTGGCAAAGACACAATTGTACCATTTCACTACCATTATCATAGCTGGAATGGGTTTCTTCACTGATGCGTATGATCTTTTCTGCATTTCCATGGTCACAAAATTACTTGGAAGAATATATTACACAGAACCAAATGCACCAAAACCAGGAACACTTCCACCAAGTGTTCAATCAGCTGTAACCGGCGTCGCGCTAGTCGGGACTCTAGCAGGCCAATTATTCTTTGGTTGGCTTGGAGACAAAATGGGAAGAAAAAAAGTTTATGGTTTAACACTTATTCTCATGGTTGTTTGTTCTGTTGCCTCAGGACTCTCTTTTGGATCAAGTCCAAAGAGTGTTATGGCAACACTTTGTTTCTTTAGGTTTTGGCTTGGTTTTGGAATTGGTGGTGATTACCCTCTTTCGGCTACAATCATGTCGGAATATGCGAATAAAAAAACTAGAGGAGCTTTTATTGCTGCTGTTTTTGCTATGCAAGGTTTTGGTATCTTAGGTGGTGGAATTGTTGCATTGATTGTGGCTTCTATATTTGATCACAAATATAATGCTCCTACTTATGAAGAAAATGCAGCGGCGTCGTTGGTGTTGCCGCAATTTGATTATGTTTGGAGACTTATTCTTATGTTTGGTGCTCTTCCGGCTGCATTGACGTACTATTGGCGAATGAAAATGCCCGAAACGGCTCGTTACACGGCTCTCGTCGCTAAGAACGCGAAACAGGCTACCGCGGATATGTCGAAGGTTTTGCAAGTTGAACTTGAAGTTGAAGAGGAAAAGGTGGAAAAGTATACGGGCAACGAGAGAAATCAGTATGGCTTGTTCAGCAAGGAATTCGTGAAGCGACACGGTTTGCATTTGCTCGGAACATGTAGTACTTGGTTTTTGTTGGATATTGCTTTCTATAGTCAGAATCTTTTCCAAAAGGATATTTTTTCCGCAATCGGATGGATACCTCCGGCAAAAGAAATGAATGCAATTCATGAGGTTTACAAGATTGCAAGAGCACAAACACTTATCGCCTTATGTAGTACTGTTCCGGGTTATTGGTTCACGGTAGCGTTGATCGATTACATGGGCCGTTTCGCTATCCAAATGATGGGATTCTTCTTCATGACTGTTTTCATGTTTGCTCTTGCTATACCATATGATCATTGGAGAGATAAAGACAATAAATTTGGGTTTGTTGCAATGTACTCACTCACATTCTTCTTTGCTAATTTTGGTCCAAATGCTACAACATTTGTTGTTCCGGCGGAGATTTTCCCGGCTAGGTTAAGGTCCACTTGTCATGGAATTTCAGCTGCTGCAGGAAAGGCAGGAGCAATTGTTGGTGCATTTGGTTTCTTGTATGCTGCACAAAGTAAAGATCCTACTCAGACCGATAAAGGGTATCCAACCGGTATTGGGATTAAGAACTCGCTTATTATGCTTGGCGTGATCAACTTTGCTGGTATGTTGTTCACTTTACTTGTTCCGGAATCAAAGGGGAAATCATTGGAAGAGTTAACCGGAGAGAATGAAGGAGAAGGTGATATTGAGGCCACTCCGCAAGAAGGATCAAGGTTTCCAAATGCTGCCACAGCCTAG 1623 0.419 MAGELGVLNALDVAKTQLYHFTTIIIAGMGFFTDAYDLFCISMVTKLLGRIYYTEPNAPKPGTLPPSVQSAVTGVALVGTLAGQLFFGWLGDKMGRKKVYGLTLILMVVCSVASGLSFGSSPKSVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILGGGIVALIVASIFDHKYNAPTYEENAAASLVLPQFDYVWRLILMFGALPAALTYYWRMKMPETARYTALVAKNAKQATADMSKVLQVELEVEEEKVEKYTGNERNQYGLFSKEFVKRHGLHLLGTCSTWFLLDIAFYSQNLFQKDIFSAIGWIPPAKEMNAIHEVYKIARAQTLIALCSTVPGYWFTVALIDYMGRFAIQMMGFFFMTVFMFALAIPYDHWRDKDNKFGFVAMYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAAAGKAGAIVGAFGFLYAAQSKDPTQTDKGYPTGIGIKNSLIMLGVINFAGMLFTLLVPESKGKSLEELTGENEGEGDIEATPQEGSRFPNAATA* 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g2665 540 MobiDBLite consensus disorder prediction 512 540 - -
Tpr1g2665 540 Pfam Sugar (and other) transporter 25 514 IPR005828 GO:0016021|GO:0022857|GO:0055085
Tpr1g2665 540 CDD MFS_PhT 24 507 - -
Tpr1g2665 540 PANTHER HIGH AFFINITY INORGANIC PHOSPHATE TRANSPORTER 3 529 - -
Tpr1g2665 540 ProSiteProfiles Major facilitator superfamily (MFS) profile. 23 508 IPR020846 GO:0022857
Tpr1g2665 540 SUPERFAMILY MFS general substrate transporter 12 514 IPR036259 -
Tpr1g2665 540 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 3 529 - -
Tpr1g2665 540 TIGRFAM 2A0109: phosphate:H+ symporter 10 517 IPR004738 GO:0005315|GO:0006817|GO:0016021
Tpr1g2665 540 Gene3D MFS general substrate transporter like domains 269 529 IPR036259 -
Tpr1g2665 540 Gene3D MFS general substrate transporter like domains 19 267 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g2665 Tpr-Chr1 30630858 30634935 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g2665 4 519 Inorganic Solute Cotransporters AT5G43360 80.814 0.0 863
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g2665 K08176 - gmx:100780201 904.049