Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tpr1g2639 | ATGGAATTAGAGATGGTAACTTCAAGTGAAGAAAGTGATGAGCAAGTAGTTCAAGATGAATCTATAGAAACCAAACGTTCTTATGATTGCACATTTTGCAAAAGAGGTTTCACTAATGCAAGGGCATTAGGAGGCCACATGAATATTCATAGAAAAGAGAGAACAAATTATAAAACCAAACAAGGCACACAAAATTCCTCACCTTTTGTTCCAATTGTTTCAAGCCAACCCTCAACTTATTATTGCATTTTGGAATCTCCTAGGAACTATGACATGTATCTTCAACCATCAAAAGCTAACCCTTCCCCACCTAGCTTTTTTCAATATGATTTTCTTAACACAAATTCTCAGTCTATGATGGGAACCAATTTGAGTCTCCAAATTGGTTCAAGCCATGAGGGTAATGATCATGTTTGGAGAGGAATAGGGAAAGATGGTGAAGGGGTGGACCTAGAGCTTAGGCTTGGTCATGATTCATACTCAAACTACTAA | 492 | 0.374 | MELEMVTSSEESDEQVVQDESIETKRSYDCTFCKRGFTNARALGGHMNIHRKERTNYKTKQGTQNSSPFVPIVSSQPSTYYCILESPRNYDMYLQPSKANPSPPSFFQYDFLNTNSQSMMGTNLSLQIGSSHEGNDHVWRGIGKDGEGVDLELRLGHDSYSNY* | 164 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tpr1g2639 | 163 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
Tpr1g2639 | 163 | PANTHER | C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN | 8 | 159 | - | - | |
Tpr1g2639 | 163 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 28 | 55 | IPR013087 | - | |
Tpr1g2639 | 163 | MobiDBLite | consensus disorder prediction | 1 | 17 | - | - | |
Tpr1g2639 | 163 | Gene3D | Classic Zinc Finger | 6 | 70 | - | - | |
Tpr1g2639 | 163 | PANTHER | OS07G0101800 PROTEIN | 8 | 159 | - | - | |
Tpr1g2639 | 163 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 30 | 50 | IPR013087 | - | |
Tpr1g2639 | 163 | SUPERFAMILY | beta-beta-alpha zinc fingers | 25 | 55 | IPR036236 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tpr1g2639 | Tpr-Chr1 | 30268775 | 30269399 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Tpr1g2639 | 19 | 156 | C2H2 Transcription Factor Family | AT3G09290 | 32.886 | 2.25e-15 | 68.2 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2H2 | Tpr1g2639 | None | None | None |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tpr1g2639 | - | - | mtr:MTR_1g044225 | 286.574 |