Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g2630 ATGGCAACAACAGAACCACTCGTTGAAGGTTCCACGGCAGAAGAAGTGGCGGCGGCGGTAGCCGTACCGGCACCAGAAGCAGGGTTAAAGCACAAACTAGAGAGAAAGTGGACTTTCTGGTTCGATAACCAATCCAAACCTAAACAAGGTGCTGCTTGGGGAACATCTCTTCGTAAGGTTTACACCTTCGATACCGTTGAAGAGTTCTGGTGTTTGCATGATCAGATATTCAAGCCAAGCAAGTTACCTGGCAATGCTGATTTTCACTTGTTTAAGGATGGGATTGAACCAAAATGGGAAGATCCTGAATGTGCCAATGGAGGAAAGTGGACCCTCACCAGCAAAGGAAAGGGAAACCTTGATACCACGTGGCTTGAAACTTTGATGGCTTTAATTGGGGAGCAATTTGGAGACTCCGAAGACATTTGCGGCGTAGTTGTGAGTGTGCGCCAGTGGCAGGACAAACTTTCATTGTGGACAAAAACAGCAGCTAATGAGTCTGTCCAGATGGGCATCGGAAGGAAGTGGAAGGAGATCATTGATGTTAGCGACAAGTTGACCTATAACTTTCATGAAGATTCTAAAAATCGGGGTGCAAAGGCTCGTTACACTGTATAA 618 0.4628 MATTEPLVEGSTAEEVAAAVAVPAPEAGLKHKLERKWTFWFDNQSKPKQGAAWGTSLRKVYTFDTVEEFWCLHDQIFKPSKLPGNADFHLFKDGIEPKWEDPECANGGKWTLTSKGKGNLDTTWLETLMALIGEQFGDSEDICGVVVSVRQWQDKLSLWTKTAANESVQMGIGRKWKEIIDVSDKLTYNFHEDSKNRGAKARYTV* 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g2630 205 Pfam Eukaryotic initiation factor 4E 32 188 IPR001040 GO:0003723|GO:0003743|GO:0006413
Tpr1g2630 205 Gene3D RNA Cap, Translation Initiation Factor Eif4e 25 205 IPR023398 -
Tpr1g2630 205 PANTHER BNAA08G29940D PROTEIN 4 196 - -
Tpr1g2630 205 ProSitePatterns Eukaryotic initiation factor 4E signature. 87 110 IPR019770 GO:0003723|GO:0003743|GO:0005737|GO:0006413
Tpr1g2630 205 SUPERFAMILY eIF4e-like 14 201 IPR023398 -
Tpr1g2630 205 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED 4 196 IPR001040 GO:0003723|GO:0003743|GO:0006413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g2630 Tpr-Chr1 30033672 30036851 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g2630 14 205 Eukaryotic Initiation Factors Gene Family AT5G35620 64.975 3.37e-86 251
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g2630 K03259 - gmx:100499799 333.954