Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g2623 ATGGAAATTCTAACTGCCGTTGCTGGAAAAGTGGCAGATTATACTGTTGTGCCTATTGGACGTCAAGCAAGTTACTTGATATTCTACAAAGGTAATTTTAAGATGTTAGCCGATCGTGTCAACGACCTACATGCTGTAAGAGAAAGGATTATTCATTCGGTTGAAGAAGAAAGAGGAAATGGTAAAGAAATCGAAAGAGATGTGCAGAACTGGTTGGAGAAAGTGGACGCGGTCATTGAAAGGGCAAATCAGCTTCAAAAAGATCCCCGTCGTGCCAATGTAAGGTGCTCAACATGGGGGTTCCCCAATTTGATTTTGCGTCATCAACTAAGTAGGAACGCCACAAAAATTGCAAACGATGTTATTCAAGTTCAAGGAAAAGGGATGTTTGATCGAGTTGGTTACCTTCCGACCCTAGATGGAGTAGCCTCCTCTTCCTCAACAAGAGGTAGTGAAAATTATGAGACAAGAGAGTCACTTAAGAATGATATTGTGAAGGCTCTAACAGACCTTAATTCATGCAACATTGGGGTCTATGGTTTGGGTGGGGTGGGTAAGACCACTCTGGTCGAAGAAGTGGCTATAATTGCAAAGCAACATAAATTGTTCGATAAAGTGGTTATAACACATGTATCCAAAAATCCAGTCTTAAAAGTTATTCAAGGGGAGATTGCAGATTCGTTGCGTTTACGATTTGATGAGGAGACAATTTTTGGAAGAGCAGAGCGCCTAAGAGAAAGAATCAAGATGGAGAAACGTATTCTTGTCATTCTAGATAATATATGGACCAAGGTTGATTTGAAGAACGTAGGAATCCCAATTGGTAATGAACATAATGGTTGCAAATTATTGATGACATGTAGAAATCAAAATGTCTTGGTGCAAATGGGTGTTCCAAAGGATTACACTTTCAAACTTGATCTTATGGAGGAGAACGAGGCATTGAGATTGTTTCAGTTTATGGCTGGGGATGTGGTTAATGATAGCAATTTGAAAGAAGTAGCAATTAAAGTTGCCAAAAATTGTGAAGGTTTACCTCTTAGGGTTGTGACAGTAGCACGTGCAATGACAGATAAGAGGGATGTCCAATCTTGGAAAGATGCATTAAGGAAACTACAAAGTAATGATCATGAAGAGATGGAAGCGTCAACTTATTCTGCTTTGGAATTGAGTTACAACTCATTGGAGAGTAATGAAATGAGGGACATCTTCTTGCTTTTTGCATTAATGCAAGGTAATGATGTAGAGTACTTTCTGAAAGTTGCAATGGGTTTGGAAATATTAAAGCATGTTAATACCGTGGATGAGGCAAGAAACAAATTTTACACAATAATCAGATCTCTGGTGGCGACTTGTCTTTTGCTTGATGTCAAAGCAGGTGGAGTGATTCAAATGCATGACTTTGTTCATGATTTTGCTATATCCATAGCTCGTAGGGACAAACATGTATTTCTAAGCAAAAATCCACATGAGGAATGGCCAACTGAGGATTTTTTAATAAGGTGCACACAAATGGCTCTATCATTTTATCAAAACGATGAGCTTCCTCAAACGATTTATTGTCCAAACATTAAGTTTTTCTCTTTGTTTAGTGTGAACCGTTCTTTAGAAATCCCCAATACTTTTTTTGAGGATATGAGAAGCCTTACTGCGCTAGATTTAACCTTCTTGAACTTGCCTTCCTTAACCACTTCATTTAAGCTCCTAACAAACCTTCAAACACTGTGTTTGGATTTTTGCATTTTGGAAAATATGGAGGCAATAGAAGCTTTGCAAAATTTAAAAATTCTCCGCCTCTGGCAATGTTCAATGATCAAGTTGCCAAGAGAAATAGGGAAATTGACTCAGTTGAGAATGCTTGATTTGAGCAATTCAGGAATAGAAGTAGTCCCACCCAATATCTTATCAAGCTTGATTAGATTAGAGGAGTTGTACATGGGCAATACCTCTATTAATTGGGAAGATGTGACTTCGACAACTCAAAATGAAAATGCTAGCATTGCTGAGCTTGGAAAACTACCAAACTTGATTGCTCTAGAATTACAAATTCGCGAGACTTGGATGTTGCCAAGGGACTTGCAATTGATGTTTGAGAAGCTGGAAAGATATAAAATAGTTGTTGGAGATGTATGGGAATGGTCTGACATTAAGGATGGATCCTTAAAAACATTGAAGCTCAAACTTGGGACCAATATACATCTGGAGCACGGAATTAAAGCATTGATTAAAGGTGTTGAGAATTTGTACTTGGATGATGTTGATGGAATTCAAAATGTGCTTTATCAACTAAATGGGGATGGATTTCCATTATTGAAACATCTCCATATCCAAAATAATGCAAACATGAAGCACATTGTTGACTCTAAAGAGAGAACTCAAATCCATGTGTCATTTCCCATCTTGGAAACATTGGTACTTCACAATCTTAAAAACTTGGAGTGTATATGTCATGGTCCAGTTTCAATAACTTCTTTTAGAAGTCTCAGTGTTATCAAAGTCAAAAATTGCATCCAGTTAAAATATATTTTGTCCTTCGATATGATTAAAGGACTTTCTTGCCTTTCTGAGATTGATCTTTATAAGTGCAATTCTGTGAAGGAGATAGTGCTCGGAGACAACAAATTAAGTGCAAATAATGATATAACTAATGAAAAGATTGAGTTTCTTCAATTACGTTCTTTGACTTTAGAATATTTGGAGACACTTGATAATTTCTTGTCTTATCATTCAATGGATTCCAGAAGTTCGCAAAAATATCAAGGTTCAGAGTCTTATGTTTCTTCACCATTTTTCAATCGTCAGGTTGTATTTCCTAATTTGCATACCCTTAAATTGAGCTCACTCCCCCATTTGAATAAAATTTGGGATGACAGTCATCATTCTATGTACAATTTGACCAACTTGATTGTGGATCATTGTGATGGGTTGAAGTACTTATTCTCTTCTGCTGTTGTTGCAAGTTTTAAGAACCTCAAACAACTTCAAATAAATAATTGTGATATGATGGAGGAGATAATAACTAAAGAGAGGGACAATGCATTGGAAGAGGTTCTTTTTTTGAAATTAGAGGAAATCAAATTGTTTAACTTGAACTTGAAGACAATATGGCACCGACAATTTGAAACAGTGAAGAGGTTGGAAGTTGAATTTTGTGAAAATATTGTGGCAGTTTTTCCTTCTTCAATGCAAAAAACATATAATAAGTTAGAGATGTTAAAGGTTCACTATTGTGTTTCAGTGGAAGAAATATTTGAATTGACTTTCAATGAAAGTGGCAGTGTTGAAGAAACAACACAGTTGAAAGAAGTTGCTATAATTTTAATGCCGAAGCTGAAAAAGATATGGAGTAGAGATCCTCAAGGAATTCTTAGTTTTCAAAATCTCATAAATATAAATCTAGAAATGTGTGAAAGTGTGGAGCATCTATTACCACTTTCTGTAGCCACTCGTTGCTCACATCTCAAGGAACTTGAAATAACCAAATGTAGAAACATGAAGGAAATTGTTGCAGAGGAGAAAGAATCTAGTGTGAATGTAGCTCCCATATTTGAGTTTAATCAACTGAATACTTTAATCCTAAGGGACTTGGATAACCTTGAGGGTTTCTATGCTAAAAAGCACACCCTAGCATGTCCATCATTGAAGAGCATTGGTGTTTTCAACTGTGCAAAGTTGAATTTGTATAGAACTCTATATACAAAAAGCTCCAATTTTTCAGATGACCAACTTTCTGTTCAAGCGCATCAACCACTTTTCATTGCGGAAGAGGTGATTCCAAATTTGGAGATGTTGAGAATAGATAATAAGGAAGCCAACATTATATTGCAAGCACAAAACTCGAGTGGCCTATTCACAAAAATGACAGAACTTGCTTTGTGTGGTTATAATAATGAAGATGCATTTCCTTATTGGTTTCTTCAAAATGCGCGCAGTCTTGAGTCACTAGTTGTTCAAGGGAGTTGCTTTAAGAAGATATTCCAAGATGAAGGATGGATAAGTGAAAAGACTCACACACGACTCAAAAAACTGTATCTGATTGGATTACCTAATCTTCAACATATATGTGAGGAAGAATCCCAAATTGACCCAGTTCTTGAGGTCCTTAAAGTCTTATGCATTACCAACTGTTCTAGTTTGATAAGTTTATTTCCTTCCTCTGCCACACTTAGTCATCTTGAATATTTGGAGATAACTGGTTGCAAAGGGTTAAAAAATTTAATTACATCTCGAACAATGCGAAGTTTGGACAAGCTCATAACACTGAAGGTAGAAGATTGTTCTTCACTTGAAGAAGTAATTACTGGAGAGGAAGACATTCACATTACATTAATTAGTCTGCGAAAGTTGGAGTTGAAATGTTTGTCTAGCCTCAACCAATTTTGCTCTAAAAAGTGCTCCTTAAAGTTTCCATTGTTGGAGATAGTAATTGTGAGAGATTGTGATAACATGAAGGTTTTTTCTGAGGGATACATAAGTACACCAAATCTTCAACAAGTTAAAATTAGAGAAAATGATGAAGGATGGTTTTGGAAGGGAAACATAAATGATACAATAACCAGCATGTTTGGAAATAAGGGAAGGAATTTCCAACGTTCTGATACTTCTGATACAAATGAGACCACCATAGGACATTTCCAAGGTATCAATGAAGATGATAAAGAGGACGGAGATATAAGTACTTTTGAATTTCAAGAGGACGACAACATAACATAA 4713 0.3622 MEILTAVAGKVADYTVVPIGRQASYLIFYKGNFKMLADRVNDLHAVRERIIHSVEEERGNGKEIERDVQNWLEKVDAVIERANQLQKDPRRANVRCSTWGFPNLILRHQLSRNATKIANDVIQVQGKGMFDRVGYLPTLDGVASSSSTRGSENYETRESLKNDIVKALTDLNSCNIGVYGLGGVGKTTLVEEVAIIAKQHKLFDKVVITHVSKNPVLKVIQGEIADSLRLRFDEETIFGRAERLRERIKMEKRILVILDNIWTKVDLKNVGIPIGNEHNGCKLLMTCRNQNVLVQMGVPKDYTFKLDLMEENEALRLFQFMAGDVVNDSNLKEVAIKVAKNCEGLPLRVVTVARAMTDKRDVQSWKDALRKLQSNDHEEMEASTYSALELSYNSLESNEMRDIFLLFALMQGNDVEYFLKVAMGLEILKHVNTVDEARNKFYTIIRSLVATCLLLDVKAGGVIQMHDFVHDFAISIARRDKHVFLSKNPHEEWPTEDFLIRCTQMALSFYQNDELPQTIYCPNIKFFSLFSVNRSLEIPNTFFEDMRSLTALDLTFLNLPSLTTSFKLLTNLQTLCLDFCILENMEAIEALQNLKILRLWQCSMIKLPREIGKLTQLRMLDLSNSGIEVVPPNILSSLIRLEELYMGNTSINWEDVTSTTQNENASIAELGKLPNLIALELQIRETWMLPRDLQLMFEKLERYKIVVGDVWEWSDIKDGSLKTLKLKLGTNIHLEHGIKALIKGVENLYLDDVDGIQNVLYQLNGDGFPLLKHLHIQNNANMKHIVDSKERTQIHVSFPILETLVLHNLKNLECICHGPVSITSFRSLSVIKVKNCIQLKYILSFDMIKGLSCLSEIDLYKCNSVKEIVLGDNKLSANNDITNEKIEFLQLRSLTLEYLETLDNFLSYHSMDSRSSQKYQGSESYVSSPFFNRQVVFPNLHTLKLSSLPHLNKIWDDSHHSMYNLTNLIVDHCDGLKYLFSSAVVASFKNLKQLQINNCDMMEEIITKERDNALEEVLFLKLEEIKLFNLNLKTIWHRQFETVKRLEVEFCENIVAVFPSSMQKTYNKLEMLKVHYCVSVEEIFELTFNESGSVEETTQLKEVAIILMPKLKKIWSRDPQGILSFQNLININLEMCESVEHLLPLSVATRCSHLKELEITKCRNMKEIVAEEKESSVNVAPIFEFNQLNTLILRDLDNLEGFYAKKHTLACPSLKSIGVFNCAKLNLYRTLYTKSSNFSDDQLSVQAHQPLFIAEEVIPNLEMLRIDNKEANIILQAQNSSGLFTKMTELALCGYNNEDAFPYWFLQNARSLESLVVQGSCFKKIFQDEGWISEKTHTRLKKLYLIGLPNLQHICEEESQIDPVLEVLKVLCITNCSSLISLFPSSATLSHLEYLEITGCKGLKNLITSRTMRSLDKLITLKVEDCSSLEEVITGEEDIHITLISLRKLELKCLSSLNQFCSKKCSLKFPLLEIVIVRDCDNMKVFSEGYISTPNLQQVKIRENDEGWFWKGNINDTITSMFGNKGRNFQRSDTSDTNETTIGHFQGINEDDKEDGDISTFEFQEDDNIT* 1571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g2623 1570 Pfam NB-ARC domain 158 393 IPR002182 GO:0043531
Tpr1g2623 1570 SUPERFAMILY L domain-like 464 899 - -
Tpr1g2623 1570 Gene3D Ribonuclease Inhibitor 924 1101 IPR032675 -
Tpr1g2623 1570 PANTHER - 20 1104 - -
Tpr1g2623 1570 PANTHER - 1372 1517 - -
Tpr1g2623 1570 PANTHER - 1124 1225 - -
Tpr1g2623 1570 PANTHER - 1095 1170 - -
Tpr1g2623 1570 SUPERFAMILY RNI-like 1113 1354 - -
Tpr1g2623 1570 Coils Coil 68 88 - -
Tpr1g2623 1570 Gene3D Ribonuclease Inhibitor 494 915 IPR032675 -
Tpr1g2623 1570 SUPERFAMILY L domain-like 1273 1504 - -
Tpr1g2623 1570 Gene3D - 309 396 IPR042197 -
Tpr1g2623 1570 PRINTS Disease resistance protein signature 175 190 - -
Tpr1g2623 1570 PRINTS Disease resistance protein signature 248 262 - -
Tpr1g2623 1570 PRINTS Disease resistance protein signature 342 356 - -
Tpr1g2623 1570 PRINTS Disease resistance protein signature 612 628 - -
Tpr1g2623 1570 Gene3D - 141 302 IPR027417 -
Tpr1g2623 1570 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 151 406 IPR027417 -
Tpr1g2623 1570 PANTHER RPP4C3 1095 1170 - -
Tpr1g2623 1570 PANTHER RPP4C3 20 1104 - -
Tpr1g2623 1570 PANTHER RPP4C3 1372 1517 - -
Tpr1g2623 1570 PANTHER RPP4C3 1124 1225 - -
Tpr1g2623 1570 Gene3D Ribonuclease Inhibitor 1250 1411 IPR032675 -
Tpr1g2623 1570 Gene3D Ribonuclease Inhibitor 1102 1249 IPR032675 -
Tpr1g2623 1570 SUPERFAMILY RNI-like 937 1085 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g2623 Tpr-Chr1 29924332 29931937 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g2623 176 634 WRKY Transcription Factor Family AT5G45050 22.873 1.39e-12 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g2623 - - mtr:MTR_2g089975 2080.83