Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g2622 ATGGAAATTCTAACATCAGTTGTTGAAAGAGCAGTAGATTATACCATTGTTCCTATTGGGCGTCAAGCACGTTACTTGATATTCTACAAAGGCAATTTTAAGATGTTAGCGGATAATGTCAAAGACGTCCAAGCTTTAAGAGAAAGGATATTTCATTTGGTTGAAGAAGAAAGAGGAAATGGCAAAGAAATTGAAAGAGATGTGTTGAACTGGTTGGAGGAAGTGAACCAGGTCATTGAAAGGGCAAATCAGCTTCAAAAAGATCCTCGTCGTGCCAATGTTAGGTGCTCAACATGTGGGTTTCCCAATTTGATTTTGCGTCATCAACTAAGTAGAAACGCCACAAAAATTGCAAAAGATGTTGTGGAAATTCAAGAAAAAGGGAATTTTAATCGAGTTGGTTATCGTCCCACCTTAGATGGAGTTGGTTATCGTTCCTCAACAACAGGTAATGAAAATTATAAGACAAGGGAGTTACTTAAGAATGATATCGTGAAAGCTCTAGCAGACCCTAATTCATGCAACATTGGGGTCTATGGTTTGGGTGGGGTGGGTAAGACCACTCTGGTGGAAGAAGTGGCTATAATAGCAAAGCAACAAAAATTGTTTGATAAACTGGTTATAGCACATGTATCCAAAAATCCAGACTTAAAAACTATTCAAGGGGAGATTGCAGATTCGTTGCGTTTAAAATTCGACGAGGAGACAATTTTTGGAAGAGCAGAACGCTTAAGAGAAAGAATCAAGATGGAGAAACGTATTCTTGTCATTCTAGATAATATATGGACCAGGCTTGATTTGAAGAATGTAGGAATCCCAATTGGTAATGAACATAATGGTTGCAAATTATTGATGACATCTAGAAATCAAGATGTGTTGCTGCAAATGGATATTCCAAAGGATTATACTTTCAAACTTGGACTTATGGAGGAGAATGAGGCATTGAGCTTGTTTCAATTTATGGCCGGGGATGTGGTTAAAGATAGCAATTTGAAAGATGTAGCAACTCAAGTTGCCAAAAAATGTGAAGGTTTGCCTCTTAGGGTAGTGACAGTAGCTCGTGCAATGAGAAATAAAAGGGACGTCCAATTTTGGAAAGATGCATTAAGAAAATTACAAAGTAGTGATCCAACAGAGATGGATGCTTTAACTTATTCTGCTTTGGAATTGAGTTACAACGCATTGGAGGATGAAATAAGGGATATCTTCTTGCTTTTTGCATTAGTGCAAGGTAATGATGTAGAGTACTTTCTGAAAGTTGCAATGGGTTTGGAAATATTAAAGGATGTCAATACTGTGGAGGAGGCAAGAAACAAATTTTACACAGTAATAAGATCTTTGGAGGTGACTTGTCTTTTGCATGATGTTAAAGCAGGTGGAGTGATCCAAATGCATGACTTTGTTCATGATTTTGCTATCTCCATAGCACGTAGGGACAAACATGTATTTCTAAGGAAACATCCACATGAGGAATGGCCAACCAAGGAATTTTTAAAAAGGTGCACACAGATTGCTCTACCTAATTATCAAAATGATGAGCTTCCTGAAACGATTTATTGTCCAAACATCAAGTTTTTCCATTTGTTGAGTGTGAATCGTTCTTTAGAAATCTCCGATACTTTTTTTGAGGGTATGGGAAGCCTTACAGTGTTAGATTTAACCTCCTTGAACTTGTCTTCATTACCCACTTCATTTCGGTTCCTAACAAACCTTAAGACATTGTGTTTAAATTTTTGCATTTTGGAGAATATGGATGCAATAGAAGCTCTGCAAAATTTAAAAATTCTTTGTCTCCGTAAATCTTCAATGATCAAGTTGCCAAAAGAAATAGGGAAATTGACTCAATTGAGAATGCTTGATTTGAGCAATTCAGGAATAGAAGTAGTCCCACCCAATATCTTATCAAGCTTGATTAGATTAGAGGAGTTGTACATGGGCAATACCTCTATTAATTGGGAAGATGTGACTTCGACAACTCAAAATGAAAATGCTAGCATTGCTGAGCTTGGAAAACTACCAAACTTGATTGCTCTAGAATTACAAATTCGCGAGACTTGGATGTTGCCAAGGGACTTGCAATTGATGTTTGAGAAGCTGGAAAGATATAAAATTGTTGTTGGAGATGTATGGGAATGGTCTGACATTAAGGATGGAACCTTAAACACATTGATGCTCAAACTTGGTACCAATATACATTTGGAGCATGGAATTAAAGCATTGATTAAAGGTGTTGAGAATTTGTACTTGGATGATGTTGATGGAATTCAAAATGTGCTTTATGAACTAAATGGGGATGGATTTCCATTGTTGAAACATCTCCATATCCAAAATAATGCAAACATGAAGCACATTGTTGACTCTAAAGAGAGAACTCAAATCCATGTGTCATTTCCCATCTTGGAAACATTGGTACTTCACAATCTTAAAAACTTGGAGTGTATATGTCATGGTCCAGTTTCAATAACTTCTTTTAGAAGTCTCAGTGTTATCAAAGTCAAAAATTGCATCCAGTTAAAATATATTTTGTCCTTCGATATGATTAAAGGACTTTCTTGCCTTTCTGAGATTGATCTTTATAAGTGCAATTCTGTGAAGGAGATAGTGCTCGGAGACAACAAATTAAGTGCAAATAGTGAAATGATAGAGTTTCTTCAATTGCGTTCTTTGACTTTAGAACATTTAGAGACGCTTGATAATTTCTTCTCTTATCATTCAACGGATTCCAGAAGTGAGCAAAAATATCAAGGTTCAGAGTCTTATGTCTCTTCACCATTTTTCAATGCTCAGGTTGTATTTCCTAATTTGCATACCCTTAAATTGAGCTCACTCTCCAATTTGAATAAAATTTGGGATGACAATCATCATTCTATGTACAATTTGACCAGCTTGATTGTGGATAATTGTGATGGGTTGAAGTACTTATTCTCTTCTGCTATTGTTGCAAGTTTTAAGAACCTCAAACAACTTGAAATAAGTAGTTGTCCTATGATGGAGGAGATAATAGCTAAGGAAGAAAGGGACAATGCATTGAAAGAGGTTCATTTTTTGAAATTAGAGAAAATCAAATTGTTGAGCATGGACAACTTAAAGACAATATGGCACCGCCAATTTGAAACAGTGCAGATGTTAGAAGTGCACGATTGTAATAAAATTGCGGTGGTTTTTCCTTCTTCAATGCAAAAAACATATAATAAGTTAGAGATGTTGAAGGTTAAAAATTGTGCTTTAGTGGAAGCAATATTTGAATTGAGCTTCAAAGAAAGTAGCAGTGTAGAAGATACAACTCAGTTGAAAGAAGTTGTTATAGCTTCGATGCCGAAGCTGAAAAAGATATGGAGTGGAGATGCTCAAGAAATTCTTAGTTTTCAAAATCTAATAAAATTATGGCTAGGAGGTTGTGAAAGTTTGGAGCATCTATTACCATTTTCTGTAGCCACTCGTTGCTCACATCTCGAGAAACTTTTCATAGTAGGATGTGAAAATATGAAAGAAATTGTTGCAGAGAAGGAATTTGGCGTGAATGTAGCTCCAATATTTGAGTTTAATCAACTGAGGGAATTATATCTAATAGACTTAGGTAAACTTGAGGGTTTCTATGCCAAAAAGCATACCCTGGTATGTCCATCATTGAAGGAACTTGGTGTTTGTGGTTGTGCAAAGTTGAATTCATATAGAACTCTATCTACAAGAAGCTCTAATTTTCCAGATGACAATCATCAACCATCTTTCATTGCTGAAGAGGTGATTCCAAATTTGGAGGTCTTGGCAATAGATAATATTGAAGCTAGCATTATATTGCAAGCCAAAAACTCAATTGGCCTATTCACAAAAATGTCATATCTTTTTTTGTATGGTTATAATAATGAAGATGCATTTCCTTATTGGTTTCTTCAAAATGCTCCTAGTCTTCAAGTTCTAGTTGTTGGGCAGAGTTTCTTTGAAAAGATATTCCAAGATGAAGGACAAATAAGTGAAAAGACTCAAACACGACTCAATCGTTTGGCTCTAAATGAATTACCTAAACTTCAACATATATGTGAGGAAGGATCTAAAGTTGACCCAGTTCTTGAGTTCCTTCAAAGCTTATGTGTTAAGGATTGTTCTAGTTTGATAAATTTATTGCCTTCCTCAGCCACCCTTAGTCATTTGGAATATCTGCAAGTAACAAATTGCAATGGGTTAAAAAATTTATTTACATCTCCAACGATGCGAAGTTTGGGCAAGCTCGCATCACTGAAGGTACAAGACTGTAATTCACTTGAAGAAGTAATTACTGGAGAGGAAAACATTCACATTACATTAAACAGTTTACAAAACTTGGTGTTGGACCATTTGCCTAGCCTCAAACAATTTTGCTCTAAAAAGTGCTTCTTAAAGCTTCCATTGTTGGATGTAGTAATTGTAAGAGAATGTCCTCGCATGAAGATTTTCTCTGAGGGATACACAAGTACACCATATCTTCAAAAAGTTAAAATTAAAATTGCAGAAGATGATGAAAAATTCTTTTGGAAGGGAAACTTAAATGATACAATAACCAGCATGTTTGAAGATAAGGAAGTCCTACGTTCTAATACACTCTGA 4581 0.3571 MEILTSVVERAVDYTIVPIGRQARYLIFYKGNFKMLADNVKDVQALRERIFHLVEEERGNGKEIERDVLNWLEEVNQVIERANQLQKDPRRANVRCSTCGFPNLILRHQLSRNATKIAKDVVEIQEKGNFNRVGYRPTLDGVGYRSSTTGNENYKTRELLKNDIVKALADPNSCNIGVYGLGGVGKTTLVEEVAIIAKQQKLFDKLVIAHVSKNPDLKTIQGEIADSLRLKFDEETIFGRAERLRERIKMEKRILVILDNIWTRLDLKNVGIPIGNEHNGCKLLMTSRNQDVLLQMDIPKDYTFKLGLMEENEALSLFQFMAGDVVKDSNLKDVATQVAKKCEGLPLRVVTVARAMRNKRDVQFWKDALRKLQSSDPTEMDALTYSALELSYNALEDEIRDIFLLFALVQGNDVEYFLKVAMGLEILKDVNTVEEARNKFYTVIRSLEVTCLLHDVKAGGVIQMHDFVHDFAISIARRDKHVFLRKHPHEEWPTKEFLKRCTQIALPNYQNDELPETIYCPNIKFFHLLSVNRSLEISDTFFEGMGSLTVLDLTSLNLSSLPTSFRFLTNLKTLCLNFCILENMDAIEALQNLKILCLRKSSMIKLPKEIGKLTQLRMLDLSNSGIEVVPPNILSSLIRLEELYMGNTSINWEDVTSTTQNENASIAELGKLPNLIALELQIRETWMLPRDLQLMFEKLERYKIVVGDVWEWSDIKDGTLNTLMLKLGTNIHLEHGIKALIKGVENLYLDDVDGIQNVLYELNGDGFPLLKHLHIQNNANMKHIVDSKERTQIHVSFPILETLVLHNLKNLECICHGPVSITSFRSLSVIKVKNCIQLKYILSFDMIKGLSCLSEIDLYKCNSVKEIVLGDNKLSANSEMIEFLQLRSLTLEHLETLDNFFSYHSTDSRSEQKYQGSESYVSSPFFNAQVVFPNLHTLKLSSLSNLNKIWDDNHHSMYNLTSLIVDNCDGLKYLFSSAIVASFKNLKQLEISSCPMMEEIIAKEERDNALKEVHFLKLEKIKLLSMDNLKTIWHRQFETVQMLEVHDCNKIAVVFPSSMQKTYNKLEMLKVKNCALVEAIFELSFKESSSVEDTTQLKEVVIASMPKLKKIWSGDAQEILSFQNLIKLWLGGCESLEHLLPFSVATRCSHLEKLFIVGCENMKEIVAEKEFGVNVAPIFEFNQLRELYLIDLGKLEGFYAKKHTLVCPSLKELGVCGCAKLNSYRTLSTRSSNFPDDNHQPSFIAEEVIPNLEVLAIDNIEASIILQAKNSIGLFTKMSYLFLYGYNNEDAFPYWFLQNAPSLQVLVVGQSFFEKIFQDEGQISEKTQTRLNRLALNELPKLQHICEEGSKVDPVLEFLQSLCVKDCSSLINLLPSSATLSHLEYLQVTNCNGLKNLFTSPTMRSLGKLASLKVQDCNSLEEVITGEENIHITLNSLQNLVLDHLPSLKQFCSKKCFLKLPLLDVVIVRECPRMKIFSEGYTSTPYLQKVKIKIAEDDEKFFWKGNLNDTITSMFEDKEVLRSNTL* 1527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g2622 1526 PANTHER RPP4C3 1121 1221 - -
Tpr1g2622 1526 PANTHER RPP4C3 20 1101 - -
Tpr1g2622 1526 PANTHER RPP4C3 1344 1510 - -
Tpr1g2622 1526 Gene3D Ribonuclease Inhibitor 502 907 IPR032675 -
Tpr1g2622 1526 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 148 405 IPR027417 -
Tpr1g2622 1526 Gene3D Ribonuclease Inhibitor 931 1319 IPR032675 -
Tpr1g2622 1526 Gene3D Ribonuclease Inhibitor 1374 1499 IPR032675 -
Tpr1g2622 1526 SUPERFAMILY L domain-like 463 901 - -
Tpr1g2622 1526 Coils Coil 68 88 - -
Tpr1g2622 1526 PRINTS Disease resistance protein signature 175 190 - -
Tpr1g2622 1526 PRINTS Disease resistance protein signature 248 262 - -
Tpr1g2622 1526 PRINTS Disease resistance protein signature 342 356 - -
Tpr1g2622 1526 PRINTS Disease resistance protein signature 981 997 - -
Tpr1g2622 1526 PANTHER - 1121 1221 - -
Tpr1g2622 1526 PANTHER - 20 1101 - -
Tpr1g2622 1526 PANTHER - 1344 1510 - -
Tpr1g2622 1526 Pfam NB-ARC domain 161 392 IPR002182 GO:0043531
Tpr1g2622 1526 SUPERFAMILY RNI-like 1115 1399 - -
Tpr1g2622 1526 Gene3D - 309 396 IPR042197 -
Tpr1g2622 1526 SUPERFAMILY L domain-like 930 1223 - -
Tpr1g2622 1526 SMART LRR_typ_2 613 636 IPR003591 -
Tpr1g2622 1526 SMART LRR_typ_2 545 567 IPR003591 -
Tpr1g2622 1526 Gene3D - 145 301 IPR027417 -
Tpr1g2622 1526 SUPERFAMILY RNI-like 1355 1490 - -
Tpr1g2622 1526 Coils Coil 1523 1526 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g2622 Tpr-Chr1 29904781 29918970 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g2622 176 633 WRKY Transcription Factor Family AT5G45050 23.540 1.89e-13 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g2622 - - mtr:MTR_2g089975 2053.87