LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Tpr1g2617	ATGTCGCTGCCGGAATGCTCAGTGGAGCAACTAACACAGTTCATCGGCCCAAACGCAACAAACGCAGAAGCTGCCGCTCAGTTCATCTGCAGCCAGTTCTCCGCGGTGGGAAATAAGTTCATAGACACACAATTCGCGGTGGACAACACTTACCTTCTATTTTCAGCTTATCTTGTTTTCTCTATGCAACTTGGTTTTGCTATGCTCTGTGCCGGTTCAGTTCGAGCCAAAAACACCATGAACATCATGCTCACAAACGTTCTTGACGCCGCCGCCGGTGGTCTTTTCTACTATCTCTTCGGTTTCGCCTTTGCTTTCGGCGGACCCTCCAACGGCTTCATCGGAAAACATTTCTTCGGTCTTAAAGACGTTCCAACCGAAGCTTTTGATTACAGTTATTTTCTCTATCAATGGGCTTTTGCCATAGCAGCCGCTGGCATCACCAGCGGCTCAATCGCGGAACGAACTCAGTTCGTTGCGTATCTTATTTACTCTTCTTTCCTCACAGGATTTGTTTACCCTGTAGTTTCTCATTGGTTCTGGTCCGGTGATGGTTGGGCTAGCGCAACCAACACCGGAAACCTTTTGTTCAGCACTGGAGTCATCGATTTTGCTGGCTCCGGTGTTGTTCATATGGTTGGTGGTGTTGCTGGTCTCTGGGGAGCACTGATTGAAGGTCCGCGAATCGGACGGTTCGATCATTCTGGTCGAGCCGTCGCTCTTCGCGGACATAGTGCTTCCCTTGTTGTTCTTGGCACCTTCATGCTTTGGTTTGGTTGGTATGGTTTCAACCCTGGTTCCTTCACTAAGATTCTCAGTCCTTATAACTCAGGTAATTACTATGGACAGTGGAGTGCGGTGGGTAGGACGGCGGTGACAACGACGTTAGCGGGATGCACGGCGGCGCTGACAACACTTTTCGGGAAAAGAATTCTCTCCGGTCACTGGAACGTTACCGACGTATGTAACGGTTTATTAGGCGGATTTGCCGCAATAACCGCCGGGTGCTCCGTCGTGGAACCATGGGCAGCAATAGTTTGTGGCTTTATAGCAGCGATAGTTTTGATCGCGTGCAACAAACTCGCGGAAAAGGTCCGTTACGATGATCCATTAGAAGCAGCGCAACTACACGGAGGATGTGGCGCGTGGGGTATAATATTCACAGCTTTGTTTGCAAAAGAAGAGTATGTGAACCAAGTTTATCCGGGTAAACCGGGTCGACCCTATGGGTTATTTATGGGTGGTGGAGGGAAGTTATTAGGGGCACATGTGATTCAAATATTGGTTATTATTGGTTGGGTTAGTGCAACAATGGGTCCTTTATTTTATATTTTGAATAAAATGAAGTTGTTAAGGATTTCAGCTGAAGATGAACTTGCGGGTATGGATATGACCCGACATGGTGGATTTGCTTATGCTTATGAAGATGATGAGTCACACAAAAATGGGATTCAATTGAGGAAAGTTGATCATAACTCTTCTTCTACTCCTACTCCAACCACAAATTCATGA	1512	0.4722	MSLPECSVEQLTQFIGPNATNAEAAAQFICSQFSAVGNKFIDTQFAVDNTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGGPSNGFIGKHFFGLKDVPTEAFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSGDGWASATNTGNLLFSTGVIDFAGSGVVHMVGGVAGLWGALIEGPRIGRFDHSGRAVALRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSPYNSGNYYGQWSAVGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFIAAIVLIACNKLAEKVRYDDPLEAAQLHGGCGAWGIIFTALFAKEEYVNQVYPGKPGRPYGLFMGGGGKLLGAHVIQILVIIGWVSATMGPLFYILNKMKLLRISAEDELAGMDMTRHGGFAYAYEDDESHKNGIQLRKVDHNSSSTPTPTTNS*	504

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Tpr1g2617	503	SUPERFAMILY	Ammonium transporter	47	453	-	-
	Tpr1g2617	503	PANTHER	AMMONIUM TRANSPORTER 1 MEMBER 1	5	494	-	-
	Tpr1g2617	503	MobiDBLite	consensus disorder prediction	483	503	-	-
	Tpr1g2617	503	Gene3D	Ammonium transporter AmtB like domains	29	491	IPR029020	-
	Tpr1g2617	503	Pfam	Ammonium Transporter Family	51	472	IPR024041	GO:0008519\|GO:0016020\|GO:0072488
	Tpr1g2617	503	PANTHER	AMMONIUM TRANSPORTER	5	494	-	-
	Tpr1g2617	503	MobiDBLite	consensus disorder prediction	488	503	-	-
	Tpr1g2617	503	TIGRFAM	amt: ammonium transporter	48	472	IPR001905	GO:0008519\|GO:0016020\|GO:0072488
	Tpr1g2617	503	ProSitePatterns	Ammonium transporters signature.	203	228	IPR018047	GO:0008519\|GO:0016020\|GO:0072488

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Tpr1g2617	Tpr-Chr1	29870091	29872636	Dispersed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Tpr1g2617	5	499	Inorganic Solute Cotransporters	AT4G13510	82.107	0.0	836

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Tpr1g2617	K03320		-	egt:105950262	837.025

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