Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g2607 ATGGCAGAAGATGGGATGTCAATTCTTGCATGTTATAATGCAACATTTAGTGCTACAAATGATATTTGGATGACTGATGATGTTATTGCCAAACGTGTTCCTCTTTTGTGTCTCCAAATTGCTTATGATCTTTTGGTGTCTCGTTTTTTCTACTTCATCCTCAAGCGTATTCGTGTGCCCCTCATTGTTGCGCAAATACTGGCTGGCTTTTCTCTGAGTCCAACTCTCTTGGGAAATTTCAAACCAATATTTGACTTGTTTTACGAGCAACAAGGAATCCTAGCCATTGAAACCTTTTCAAACTTGGGAATATTGTACTATGTGTTCCTAAGTGGTTTAGAAATGAATTCAGACGTAATCTTAAGATCAAGAAAAAAAGGTACAAGCCTAGCAGTTGTTGGCATTGTGACATCAATGTTATTTGGTGTTGGATTGCTTACTGTACAACACAAGCTTGAAGATGAAAACGATACTTTCTCACTAACACCTAAAGAAAATCATAATGAAGCCTATTTATTTTGGTCTTTAGCACTTTCTGTCACGGGTTTCCCAGTCCTTGCAAGAATCTTAGCTAAGCTTAAGCTTTTGTATACAAAGCTTGGAAAAGATGCATTAACAGCAGCTATGTTAACTGATGCATATGGTTGGGTTTTATTCACATTGTTGATTCCTTATTCTAAGATTGGTGGAAAACCTTTTCTCTCAGTAATCAGTACCTTGTTGTTCATAGTTTTTTGTTTTACTGTGGTGAGACCTATCCTTACTCCAATCGTTGAAAAGAAAACGAGTGCGAACACATGGCGCAAGTCGCAATTGTTGGACTTGTTAATGGGAGTGTTTATTTGTTCATTTATTACAGATTGTCTTGGTACACACCCTATTGTTGGAGCTTTTGTGTTTGGATTGATTTTGCCTCATGGGAAGTTTGCTGATATGGTTATGGAAATGTCAGATGATTTTGTTTCTGGGATTTTATGTCCTGTCTACTTTGCTGGATTTGGTTTTAGACTCAACTTGCCTTTTCTTTTGAAGCAACAATCTGCAGGTTTAATGATGTTGATTGTGGTTTTGTTATGCATACCAAAAGTTTTGAGCTCTTTGATTGTCACTTTTTTCTTCGGTATGCCTGCTCGAGATGGCCTTGCCATTGGATTGCTTCTCAACACCAAGGGCGTCATGGCTATCATACTACTAAATGTTGCGTGGGACAAAAGGATTTTGGATCCATATTGTTTCATGGTTATGATGCTTGCCATTATATTAATGACAGTGATTGTTTCTCCCTTGATAAGTGCTATATACCAACCAAAATTCCGATTCATGCAATCACAATTAAAGACCATGCAAAAGCTAAGGTTCGATATGGAACTTCGAGTTGTGGCATGTGTTCACAATACTAAACATGCCAATAGCATGATCCATGTCCTTGAAGCGACAAATGCAACCAGAGTTTCACCTATACATGTCTCAGTAGCTCACCTAGTTGAACTCACTAGACATGGCACAGCTATTCTTGTTTCACAAATGGATCGTTCAGACAGCACTGTTGGAACAGAAACAACCAACTATGGATCACAATCAAAGTTTGAGAGCATAACTAATGCATTCGAAGAATTTGTAAAACAGTACAATGCTGTTAGAATTGACACATCAAATGTTGTCTCATCCTACACAACAATCCATGAAGACATATTCAATGTAGCCGAAGAGAAACGCGCGAGTTTGATTCTCCTTCCCTTTCACAAAGAGTACTCAACAATAGAAGGTGGTTTAGAAATAATCAACAATCAACATTGTGAGATAAACAAAAATGTTTTACAACAAGCACCTTGTTCTGTAGGGATCTTTGTGGACCGTGGTTTAGGATCATTATTAAAAACCAAAATGCGCATTGTAATGATCTTCATTGGAGGACCTGACGATCGTGAAGCCTTGTCTATTGCGTGGAGAATGGCAGGGCATTCAGGAACACAATTACATGTTTTGAGGATTCATTTGTTAGATAAGGCTGCAGAAGAAAAATTATCGAAAACGAAAAAAATAAAGTCTCATCATGGAATATTGTCGACGGTTATGGACAGTGTGATGCAAAACGAGTTAGATGAAAAGTACTTAATTTCCTTCAGGCACAAGGCAGTAAACAATAATGATTCTATTGTTTATTCAGAGAAGGAAGTGCATTCCAATACTGGTGAAGAGATTCCGACACTTTTGAATGAGATCGATAAATCTGGATATGATTTGTACATTGTTGGACAAGGAAGTGGTAAGAACACGAAGATTTTTTCGAAGTTGTTGGAATGGTGTGACCATCCTGAACTTGGTGTTATTGGAGACATATTGGCTTCAACTAGTTTTGGTTCACAATCTTCTGTGCTTATTGTGCAGCAATATATGATTGGGAGAAAAACTGTTGTTAAACAAAGTCATCGTGAATCGATGAAAACTGGTCCTGAAATTTTGTAA 2466 0.3755 MAEDGMSILACYNATFSATNDIWMTDDVIAKRVPLLCLQIAYDLLVSRFFYFILKRIRVPLIVAQILAGFSLSPTLLGNFKPIFDLFYEQQGILAIETFSNLGILYYVFLSGLEMNSDVILRSRKKGTSLAVVGIVTSMLFGVGLLTVQHKLEDENDTFSLTPKENHNEAYLFWSLALSVTGFPVLARILAKLKLLYTKLGKDALTAAMLTDAYGWVLFTLLIPYSKIGGKPFLSVISTLLFIVFCFTVVRPILTPIVEKKTSANTWRKSQLLDLLMGVFICSFITDCLGTHPIVGAFVFGLILPHGKFADMVMEMSDDFVSGILCPVYFAGFGFRLNLPFLLKQQSAGLMMLIVVLLCIPKVLSSLIVTFFFGMPARDGLAIGLLLNTKGVMAIILLNVAWDKRILDPYCFMVMMLAIILMTVIVSPLISAIYQPKFRFMQSQLKTMQKLRFDMELRVVACVHNTKHANSMIHVLEATNATRVSPIHVSVAHLVELTRHGTAILVSQMDRSDSTVGTETTNYGSQSKFESITNAFEEFVKQYNAVRIDTSNVVSSYTTIHEDIFNVAEEKRASLILLPFHKEYSTIEGGLEIINNQHCEINKNVLQQAPCSVGIFVDRGLGSLLKTKMRIVMIFIGGPDDREALSIAWRMAGHSGTQLHVLRIHLLDKAAEEKLSKTKKIKSHHGILSTVMDSVMQNELDEKYLISFRHKAVNNNDSIVYSEKEVHSNTGEEIPTLLNEIDKSGYDLYIVGQGSGKNTKIFSKLLEWCDHPELGVIGDILASTSFGSQSSVLIVQQYMIGRKTVVKQSHRESMKTGPEIL* 822
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g2607 821 Gene3D - 35 440 IPR038770 -
Tpr1g2607 821 Gene3D - 457 766 - -
Tpr1g2607 821 PANTHER CATION/H(+) ANTIPORTER 21-RELATED 7 805 - -
Tpr1g2607 821 Pfam Sodium/hydrogen exchanger family 46 429 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Tpr1g2607 821 PANTHER CATION/H + ANTIPORTER 7 805 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g2607 Tpr-Chr1 29765665 29769033 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g2607 11 799 Antiporter Super Family AT2G13620 38.000 7.81e-180 536
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g2607 - - gmx:100792990 959.133