Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g2597 ATGAAGGAAGCCTCTAGAAATAACCTTCATTCAGGATCTACAGCAACAATTGTATTGGTTGCAGATGATAAAATTTTGGTTGCCAATATTGGAGACTCTAAGGCTTTCATTTGCTCTGAAAATTTTCAGTCTCCTAAGGAGGCTAAAGTGAAGGAATTGACTAGCGATCATCATCCAGACAGAGAGGATGAAAAAACTCGGGTGGAAGCTGCTGGTGGTCAAGTTCTAAATTGGGGTGGTGTACCTCGCGTAAATGGTCAGTTAGCTATTACACGGGCTATGGCAGCAGTTGTTGTTCCTCTGGAATCTGCTAAATCTTCTGCGAACTCACTTAGAAGAAGCTATACTGAAAATGAGGATGCAGGCTTCCCATCATTTGGGCTGCAGGAATCAGCTTACAGAAGCTCAGCTAATGATATCACCTCTGATCTATTGCACCTGGAGCACCCTCATTTGCTAGATACCAAGTTTAAGCGAATATTGGTTGAAGTGAAACATGGTGATTTTGGATGTTTTTATTTATCTGAAAATCTTGATGATTCAGTGGATTCTAAGTGGCCTCCCAAAAAAGATGACCGGGAAGACTATTTGTATGAACTACCCCAGCCTCTACCAGATGCCCTTCACCAACAAGCTGCAGTAGATGGCCCTGTAATTTTGTACAATGACCAAAACTTTTGCTTTCACCTGAGTTCAACTATCAATCAAGCCAAAGACCAATGCATAAACCCTGAAGGCTTTGCCAGTTTTATTGGTCTTCTTGAATCAATTCCTTTAATTGATGCTGGTTCAGATAATGAGTCTTCTGATTATTCGATGCCTGATTCAAGGTAA 834 0.4113 MKEASRNNLHSGSTATIVLVADDKILVANIGDSKAFICSENFQSPKEAKVKELTSDHHPDREDEKTRVEAAGGQVLNWGGVPRVNGQLAITRAMAAVVVPLESAKSSANSLRRSYTENEDAGFPSFGLQESAYRSSANDITSDLLHLEHPHLLDTKFKRILVEVKHGDFGCFYLSENLDDSVDSKWPPKKDDREDYLYELPQPLPDALHQQAAVDGPVILYNDQNFCFHLSSTINQAKDQCINPEGFASFIGLLESIPLIDAGSDNESSDYSMPDSR* 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g2597 277 PANTHER ALPHABET, ISOFORM E-RELATED 4 93 - -
Tpr1g2597 277 PANTHER ALPHABET, ISOFORM E-RELATED 94 264 - -
Tpr1g2597 277 ProSiteProfiles PPM-type phosphatase domain profile. 1 147 IPR001932 -
Tpr1g2597 277 CDD PP2Cc 11 93 IPR001932 -
Tpr1g2597 277 Gene3D - 1 117 IPR036457 -
Tpr1g2597 277 Pfam Protein phosphatase 2C 7 94 IPR001932 -
Tpr1g2597 277 PANTHER PROTEIN PHOSPHATASE 2C 50-RELATED 4 93 - -
Tpr1g2597 277 PANTHER PROTEIN PHOSPHATASE 2C 50-RELATED 94 264 - -
Tpr1g2597 277 SUPERFAMILY PP2C-like 7 94 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g2597 Tpr-Chr1 29670667 29674265 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g2597 2 95 PP2C-type Phosphatase Gene Family AT3G63320 48.462 9.23e-33 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g2597 - - gmx:100781476 277.715