Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g2581 ATGGACAAAATTTTGAAAGATGATGAACTAGCAACTGCATTTGATTGGAATAAGAGGGTGAATGTCATTAAAGATGTTGCAAATGCTCTATGCTATATGCATCATCATTGTTCACCTCCGATCATTCATCGTGATATATCCAGCAAGAATGTTATTTTGGATTTGGAATATGTGGCTCATGTATCAGACTTCGGACAGCTAAGTTTCTTAATCCCGATTCTTCCAACTGGACCTCTTTTGTGGGCACATTTGGATATGCTGCAACGGGTTAATTTCCTCTTTCAACTTGCATACACAATGGAAGTAAATGAAAAGTGTGATGTGTATAGTTTTGGTGTGTTAACCATGGAAATACTGTTTGGAAAGCATCCCGGAGATGTTGTATCTGCTTTGTTGCAATCAAGTCGTATATACCAAACAATTGATGCTATGTCATTGAATGATAAGTTGGATCAACGCCTTCCTCGTCCTACGAATGATATTGGAAAAGAAGTGGTATCAATTATGAGAATTGCATGTCTTAATTGA 528 0.3712 MDKILKDDELATAFDWNKRVNVIKDVANALCYMHHHCSPPIIHRDISSKNVILDLEYVAHVSDFGQLSFLIPILPTGPLLWAHLDMLQRVNFLFQLAYTMEVNEKCDVYSFGVLTMEILFGKHPGDVVSALLQSSRIYQTIDAMSLNDKLDQRLPRPTNDIGKEVVSIMRIACLN* 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g2581 175 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 2 173 - -
Tpr1g2581 175 Pfam Protein tyrosine and serine/threonine kinase 12 170 IPR001245 GO:0004672|GO:0006468
Tpr1g2581 175 ProSiteProfiles Protein kinase domain profile. 1 175 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g2581 175 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 2 173 - -
Tpr1g2581 175 ProSitePatterns Tyrosine protein kinases specific active-site signature. 41 53 IPR008266 GO:0004672|GO:0006468
Tpr1g2581 175 SUPERFAMILY Protein kinase-like (PK-like) 10 140 IPR011009 -
Tpr1g2581 175 Gene3D Transferase(Phosphotransferase) domain 1 1 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g2581 Tpr-Chr1 29488312 29488929 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g2581 14 124 Receptor kinase-like Gene Family AT1G75820 41.071 1.03e-23 95.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Tpr1g2581 PK_Tyr_Ser-Thr 8.7e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g2581 - - mtr:MTR_0365s0020 225.328