Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g2573 ATGGCAGTTGCTATAAAGACTCTCAATAGAGAAGGACCCCAAGGCCACAAAGAATGGGAGGCTGAAATTAACTGTCTTGGTGCTCTCCAACACCCAAATTTGGTTAAACTTATTGGCTACTGCCATGAAGATGAAAATAGAATGCTTGTTTATGAGTATATGCCAAAAGGATGCCTTGAAAATCATTTGTTTAGGAGGTTAACACCTCTACCATGGACTGTGAGAATGGAAATTATGCTTGGTGCTGCAAAAGGCCTTGCATTTCTCCATGAGGAAGCTCAAAATCCACTAATATACAGAGATTTCAAAACCTCCAATATCCTATTGGATTCGCAATATAATGCTAAACTTTCTGATTTTGGGTTGGCTAAAGATGCTCCAATGGGAGACAAGACTCATGTTTCAACTCAAGTGATGGGAACTCAAGGCTATGTAGATCCTGAGTATGTGGTGACAGGACACCTTACTTCTAAGAGTGATGTCTATAGTTTTGGTGTGGTTCTCCTTGAGATGTTAACTGGAAGACAAGCAATTGATTACAAAAGGGCACAAAAAGAACAATGTTTGGTTGAATGGGCAAAGCCCTACTTAAAATCCAAAATAGGGTTTTACCAATTGATGGATCCAAAATTGAAAGGTAGATACTCACCAAGAGGAGCAAAGAAAGCAATCAAGTTAGTTTCAGCCTGTCTTAGCTGCAACAAAAAATCAAGACCTAAAATGAACGAAGTTGCTAAGGTGCTACAAAGTATCCTTGATTGCAAAGACACACCTCCAGTTAAGAGTTCACATGGTCTCAAAGTTGGTTCATCATCTTCAGTTTCATCTACTCCACGATTTCGAGCTTCGCGATTGAACCTTACCCCCAGTTTTCCTTCACCAAATCCTCCTTGTGGTGAAAATCCATGA 909 0.3993 MAVAIKTLNREGPQGHKEWEAEINCLGALQHPNLVKLIGYCHEDENRMLVYEYMPKGCLENHLFRRLTPLPWTVRMEIMLGAAKGLAFLHEEAQNPLIYRDFKTSNILLDSQYNAKLSDFGLAKDAPMGDKTHVSTQVMGTQGYVDPEYVVTGHLTSKSDVYSFGVVLLEMLTGRQAIDYKRAQKEQCLVEWAKPYLKSKIGFYQLMDPKLKGRYSPRGAKKAIKLVSACLSCNKKSRPKMNEVAKVLQSILDCKDTPPVKSSHGLKVGSSSSVSSTPRFRASRLNLTPSFPSPNPPCGENP* 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g2573 302 PANTHER OS01G0588500 PROTEIN-RELATED 1 268 - -
Tpr1g2573 302 ProSitePatterns Serine/Threonine protein kinases active-site signature. 97 109 IPR008271 GO:0004672|GO:0006468
Tpr1g2573 302 MobiDBLite consensus disorder prediction 262 302 - -
Tpr1g2573 302 Pfam Protein kinase domain 3 245 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g2573 302 ProSiteProfiles Protein kinase domain profile. 1 252 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g2573 302 SUPERFAMILY Protein kinase-like (PK-like) 3 292 IPR011009 -
Tpr1g2573 302 PIRSF ILK 1 261 - -
Tpr1g2573 302 Gene3D Phosphorylase Kinase; domain 1 1 54 - -
Tpr1g2573 302 Gene3D Transferase(Phosphotransferase) domain 1 55 265 - -
Tpr1g2573 302 MobiDBLite consensus disorder prediction 264 289 - -
Tpr1g2573 302 PANTHER TYROSINE KINASE FAMILY PROTEIN 1 268 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g2573 Tpr-Chr1 29402735 29405807 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g2573 1 248 Glycoside Hydrolase AT3G07070 52.778 1.20e-87 266
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Tpr1g2573 Pkinase 8.8e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g2573 - - mtr:MTR_3g462840 395.201