Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g2558 ATGCAAATAAGAACGATAGGTACATCCATAGACATGTTCGACGACATGCCAAATGATCTTTTGACAAAGCTAAGGTACTTAAGGGTGTTAACCTTGGTAGGTGCTTATTTCTACAAGTTACCTGATTCAATAGGAGAACTAAAACATCTGCGCTCTCTAGAAGTGTCTGACACCGAGATTATAAGGTTACCTGAATCCATCTGCAGTTTGTACAATTTGCAAACACTCAAGTTAGTTGGATGTTATAATCTTATTGAACTTCCAAAAGATATTCATAAACTTGTCAACTTGCGCTACTTGGATATTAGAGGCACTTGCTTGAAGTCGATGCCATTGAAAATCGGTGAATTGAAAAACCTTAAAAAGTTGAGTGACTTTTTTGTTGGCGAAGATCATGGATCTTCCATTAGTGAACTGGGAGAGCTATGTAATTTACATGCATCTTTGTTCATTCATGACATAGAACATGTTGTCAATTATAAGGATTCTGAAAAGGCGAAATTGAAGGAAAAATATGGCCTTGAAAAATTGTCTTTGGATTGGGGTGGAAGTGGTGATACCGATAACTCATAG 573 0.3682 MQIRTIGTSIDMFDDMPNDLLTKLRYLRVLTLVGAYFYKLPDSIGELKHLRSLEVSDTEIIRLPESICSLYNLQTLKLVGCYNLIELPKDIHKLVNLRYLDIRGTCLKSMPLKIGELKNLKKLSDFFVGEDHGSSISELGELCNLHASLFIHDIEHVVNYKDSEKAKLKEKYGLEKLSLDWGGSGDTDNS* 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g2558 190 PANTHER OS07G0273700 PROTEIN 18 185 - -
Tpr1g2558 190 PANTHER DISEASE RESISTANCE PROTEIN RP 18 185 IPR044974 GO:0006952
Tpr1g2558 190 SUPERFAMILY L domain-like 15 149 - -
Tpr1g2558 190 Gene3D Ribonuclease Inhibitor 2 188 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g2558 Tpr-Chr1 29173467 29174318 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g2558 27 136 WRKY Transcription Factor Family AT4G12020 31.532 1.19e-07 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g2558 - - ccaj:109812375 289.656